Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5781g00001 ATGGTGGTGATAAATGTGAAGGAGTCGACGATTGTTCGACCGGAGGCGAAGACGCCGCGGGTGGTGATTTGGAATTCCAACGTCGACTTGGTGGTGGTGGATATCCACCTTCCGACGGTGTACTTCTACAGGCCGACGGCGGCGGGTGCGTCGAGTTTCTTCGACGCTAAGGTTCTGAAGGAGGCTCTGAGCAAGGCTCTGGTGCCTTACCCAGTGGCTGGGCGGCTTCGCCGGGACGACCACGGCCGCGTAGAAATTGACTGCAATGGCGAAGGCGTCCTCTTCGTCGAGGCCGAAACCGATAACGTCATTGACGATTTCGGTGACTTCGCTCCGACGCTTGAACTCCGGCAGCTCATTCCTGCCGTGGATTATTCCCGGGGAATCGAAACTTATCCCATTTTTGTGTCACAGGTAACACATTTCAACTGTGGAGGGGTGTCATTTGGGGTTGGTATGCATCATTATGCAGCAGATGGATATTCTGGTCTTCACTTTGTCAACACATGGTCAGACATGACTCGTGGCCTTGATCTCACCCTCTCTCCCTTCATCGACCGGACCCTTCTCCGAGCCCGGAACCCTCCTCGGCCGGTATTCGATCATGTCGAATTCAAACCGCCTCCGGCCATGACCACTCCCTCCTCCTCACCACCACCACCAGCTGCAGTATCTATTTTCAAAATAACTCGTGACCACATAAATCTCCTGAAATCCAGGTCCAAAGAAAATGGCAACACAATCAATTATAGTTCCTACGAGATGTTGGCTGGCCATGTGTGGAAAAACGTGTCCAAGGCACGTGACTTACCCCATGATCAAGAAACCAAACTGTACATTGCTACTGATGGAAGGTCTAGATTGAAGCCAGAGCTCCCAGAAGGTTACTTTGGGAATGTGGTGTTCATGGCCACACCAATGGCTCTGGCTGGTGAAATCATATCAAATCCAACTTGGCATGCTGCAAGAAAAATCCATGAGGCTTTGGTGAGAATGGACGATGAGTATTTGAGGTCGGCTTTGGATTACTTGGAGCTTCAACCTGATTTGAAAGTCCTTGTTCGGGGGGCTCATACCTTTAAGTGTCCCAATTTGGGGATCACTAGTTGGGTTAGATTGCCAATACATTATGCTGATTTTGGATGGGGGAGGCCTATTTTTATGGGACCTGCTGGGATTGCGTACGAGGGACTGTCTTATATAATTCCAAGTTCATCTAATGATGGCAGCTTCTCTCTCGCCATTGCTCTCCTTCCTGACCATATGAAAGTGTTTCAGGAATTGTTATATGACATCTAG 1299 0.4988 MVVINVKESTIVRPEAKTPRVVIWNSNVDLVVVDIHLPTVYFYRPTAAGASSFFDAKVLKEALSKALVPYPVAGRLRRDDHGRVEIDCNGEGVLFVEAETDNVIDDFGDFAPTLELRQLIPAVDYSRGIETYPIFVSQVTHFNCGGVSFGVGMHHYAADGYSGLHFVNTWSDMTRGLDLTLSPFIDRTLLRARNPPRPVFDHVEFKPPPAMTTPSSSPPPPAAVSIFKITRDHINLLKSRSKENGNTINYSSYEMLAGHVWKNVSKARDLPHDQETKLYIATDGRSRLKPELPEGYFGNVVFMATPMALAGEIISNPTWHAARKIHEALVRMDDEYLRSALDYLELQPDLKVLVRGAHTFKCPNLGITSWVRLPIHYADFGWGRPIFMGPAGIAYEGLSYIIPSSSNDGSFSLAIALLPDHMKVFQELLYDI 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5781g00001 432 Gene3D - 211 432 IPR023213 -
Pral5781g00001 432 Gene3D - 1 207 IPR023213 -
Pral5781g00001 432 FunFam Spermidine hydroxycinnamoyl transferase 2 205 - -
Pral5781g00001 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 429 - -
Pral5781g00001 432 FunFam Tryptamine hydroxycinnamoyl transferase 209 430 - -
Pral5781g00001 432 Pfam Transferase family 4 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5781g00001 Pral-Chr5781 3771 12416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5781g00001 4 432 Monolignol Biosynthesis Gene Families AT5G48930 70.208 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5781g00001 K13065 - qsa:O6P43_027958 667.151