Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5780g00002 ATGGGCTTCGAATTGGCGAGCCTTCCAAGCGCAGCCGCATGGCTTGCAACCATCGTCGTCCTCATCCTCTTCCGCGGCCACCTCCGTCGCCGACAATACAAGCTGCCACCAGGCCCAAGGCCGTGGCCCATCATTGGCAACCTCAACCTCATCAGCCCCCTACCCCACCGATCCCTCCACGCCCTCTCGCAAAAATACGGCCCCATCATGCACGTCTGGTTCGGATCCAGGCCAGTCGTCGTCGGCTCCTCCGCCGAAATGGCCAGAGAGTTCCTCAAAACCCACGACATTGCCTTGGCCGGCCGGCCCAAGTTCGCCGCCGGCAAGTACACCACCTACAACTACTCCGACATGACGTGGTCTCAGTACGGCCCATACTGGAAACAGGCTCGCAAAATATGCCAGACCGAACTGTTCAGCGCGAAACGCCTAGAATCCTTCGAATACATCAGAAGAGAAGAACTAAAAGCTTTGCTCAAAGAACTATACGATTCTGCCAACAAAACCATAGTACTGAAAGACCACCTATCTACTCTGAGCCTGAACGTGATCAGCAGGATGATGCTGGGGAAGAAGTACCTGGAGAAGAGCCAAGACGCCGTCGTTTCGCCGGAGGAATTCAAGAAGATGCTGGACGAGCTGTTCTTGTTGAACGGAGTGTTGAATATCGGAGACTTCATTCCATGGATCAATTTTCTGGACTTGCAGGGTTATATAAAGAGGATGAAGGTGTTGGGCAAGAAGTTCGACAGATTCATGGAACATGTTTTGGATGAACACAACGAAAGAAGAAGAGGGAATCCAGATTATGTAGCTAAAGATATGGTGGACGTGCTTCTTCAGCTTGCAGACGATCCTACTCTCGAGGTCAAGATCGAGAGGCATGGAGTCAAAGCCTTCACACAGGACTTACTAGCTGGAGGCACAGAAAGCTCAACGGTAACAGTGGAATGGGCAATCTCAGAGCTTCTGAGAAAGCCGGAGATATTCAAGAAGGCGACGGAGGAGCTGGACACAGTGATTGGAAGAGAGCGGTGGGTGGAAGAAAAAGACGTCCCCAACTTACCATACATCAACGCGATCGCCAAAGAAACCATGAGGCTCCACCCAGTGTCTCCGATGCTGGTTCCCAGAATGGCCAGCGAAGACGTCAAGGTCGCCGGCTACGACATCCCCAAAGGAACACAGATCCATGTTAACATCTGGGCCATCGGAAGAGACCCTGACATATGGGAAAACCCTAACGACTTCGAACCAGAGAGATTCTTGACGAAGAACATCGACGTGAAGGGACATGACTTCGAGCTGTTACCGTTCGGAGCAGGAAGAAGAATGTGCCCAGGTTATCCACTGGGGATAAAGGTGATTCAGACGAGCTTGGCGAATCTGTTGCATGGGTTTCACTGGAGGCTGAACGATGGCATGAAGAAGGAGGATTTGAGCATGGATGAGATTTTTGGACTCTCAACTCCAAAGGAATTTCCTCTTGAAACAGTAGTTCAGCCCAGACTTGCTGCTCATCTTTATTAA 1530 0.5131 MGFELASLPSAAAWLATIVVLILFRGHLRRRQYKLPPGPRPWPIIGNLNLISPLPHRSLHALSQKYGPIMHVWFGSRPVVVGSSAEMAREFLKTHDIALAGRPKFAAGKYTTYNYSDMTWSQYGPYWKQARKICQTELFSAKRLESFEYIRREELKALLKELYDSANKTIVLKDHLSTLSLNVISRMMLGKKYLEKSQDAVVSPEEFKKMLDELFLLNGVLNIGDFIPWINFLDLQGYIKRMKVLGKKFDRFMEHVLDEHNERRRGNPDYVAKDMVDVLLQLADDPTLEVKIERHGVKAFTQDLLAGGTESSTVTVEWAISELLRKPEIFKKATEELDTVIGRERWVEEKDVPNLPYINAIAKETMRLHPVSPMLVPRMASEDVKVAGYDIPKGTQIHVNIWAIGRDPDIWENPNDFEPERFLTKNIDVKGHDFELLPFGAGRRMCPGYPLGIKVIQTSLANLLHGFHWRLNDGMKKEDLSMDEIFGLSTPKEFPLETVVQPRLAAHLY 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5780g00002 509 CDD CYP71_clan 67 496 - -
Pral5780g00002 509 FunFam Cytochrome P450 84A1 27 504 - -
Pral5780g00002 509 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5780g00002 509 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5780g00002 509 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5780g00002 509 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5780g00002 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5780g00002 509 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5780g00002 509 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5780g00002 509 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5780g00002 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5780g00002 509 Pfam Cytochrome P450 36 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5780g00002 509 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5780g00002 509 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5780g00002 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5780g00002 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Pral5780g00002 509 PANTHER CYTOCHROME P450 98A9 13 509 - -
Pral5780g00002 509 Gene3D Cytochrome P450 28 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5780g00002 509 SUPERFAMILY Cytochrome P450 36 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5780g00002 Pral-Chr5780 25314 33418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5780g00002 15 509 Cytochrome P450 AT5G07990 43.651 7.44e-146 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5780g00002 K20623 - gmx:100790480 837.795