Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5780g00001 ATGCCTTCCACAAGAATTCTCTTGAAATGTTTGGTTCTCGGCTGTTTCAAGGCCAATCAATCTAAATCCTTGTGCTCTGCTACTAATCACAGTCATAATCATCGTCATAGGAATAAGTGCTTGGCCTCCAGAAAGGTGATGAGCTCGAGAAGGCTGTCTCTCTCTGATTTGAGCAATTCTTCTTCGCTCTCTATCATGAGCGATCTCTCCAACTCTGTTCTCGCTTCAAATCTTCATATCTTCACCCTCAAGGAGCTCAAGGAGATCACCCACAATTTCTGCAAATCCAGTGTTCTTGGTGAAGGAGGGTTTGGCAAAGTTTATAAAGGCTTCATTGATGATAAGCTTAGGCCTGGTCTGGAAGCTCAGGTTGTAGCGGTTAAAGTTCTGGACTCAGATAGCAAACAAGGACACAGAGAGTGGTTGGCCGAAGTAATCTTTCTGGGGCAATTGAAGCATCCCCATCTGGTGAACTTGATTGGATATTGTTGTGAAGATGAACACAGACTTCTGGTTTACGAATACATGGAGAGGGGAAATCTAGAGAACAAGCTTTTCAAGGGTTACTTAGCAGCCTTGCCTTGGCTCACAAGAATCAAAATAGCCATTGGGGCTGCAAAAGGACTTGCTTTCCTTCACGAAGAAGACCAACCTGTCATCTACAGGGACGTCAAAGCCTCAAACATCTTATTAGACGCAGATTACAATGCCAAGCTCTCTGATTTTGGTCTTGCCATTGATGGCCCAGAAGAAGATCAAGTTCATATCACCACCCGAGTAATGGGTACTCATGGTTATGCTGCTCCTGAGTACATAACTTCTGGGCATTTGACAACCATGAGCGATGTCTATAGTTTCGGGGTGGTTCTGTTAGAGCTGATTACAGGAAAGAGATCTGTGGATAAGAACCGTCCAATCAGAGAGCAGGATTTGGTGGAATGGGCAAGGCCATTGTTAAAAGACCTTAATAAGCTTGAAAGAATAATGGACCCAAGACTAGAAGGTCAATACTCTTATGAAGGGGCTAGAAAAATGGCGTATCTGGCTCACCAATGTCTGAGCCAACAACCCAAGTCTAGACCCTCCATGCGAGCCGTGGTTAAGACGTTGGAACCACTCATGAACCTAACTGATATACCAGTGGGATGCTTTGTCTATGTGGTCCCCAACGAAAGAACTGAAAAAATTAAACCAGTTCAGTGTGGGGATAGTCAGATTGGAAGAAATGGGAATGAATGTGAACAGAAGAAGAAGGAAGACATGGAGCAGACGAAGAAGAAGAAGAAGATGGAGGATGTTCACGGAAATCGAAAAGGTCAAAGAAGAAGACGTCAGATTAAACTGCTGAGATCATCTGGTTCTGTTCATTCAGACACTGCTCTGTACAAAGTCCTTGGCACTAACCTTTACTCTCCAAAGCAAGAACCATAA 1431 0.4396 MPSTRILLKCLVLGCFKANQSKSLCSATNHSHNHRHRNKCLASRKVMSSRRLSLSDLSNSSSLSIMSDLSNSVLASNLHIFTLKELKEITHNFCKSSVLGEGGFGKVYKGFIDDKLRPGLEAQVVAVKVLDSDSKQGHREWLAEVIFLGQLKHPHLVNLIGYCCEDEHRLLVYEYMERGNLENKLFKGYLAALPWLTRIKIAIGAAKGLAFLHEEDQPVIYRDVKASNILLDADYNAKLSDFGLAIDGPEEDQVHITTRVMGTHGYAAPEYITSGHLTTMSDVYSFGVVLLELITGKRSVDKNRPIREQDLVEWARPLLKDLNKLERIMDPRLEGQYSYEGARKMAYLAHQCLSQQPKSRPSMRAVVKTLEPLMNLTDIPVGCFVYVVPNERTEKIKPVQCGDSQIGRNGNECEQKKKEDMEQTKKKKKMEDVHGNRKGQRRRRQIKLLRSSGSVHSDTALYKVLGTNLYSPKQEP 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5780g00001 476 ProSiteProfiles Protein kinase domain profile. 93 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5780g00001 476 Gene3D Phosphorylase Kinase; domain 1 64 175 - -
Pral5780g00001 476 Gene3D Transferase(Phosphotransferase) domain 1 176 379 - -
Pral5780g00001 476 FunFam Serine/threonine-protein kinase BIK1 60 175 - -
Pral5780g00001 476 MobiDBLite consensus disorder prediction 410 438 - -
Pral5780g00001 476 SUPERFAMILY Protein kinase-like (PK-like) 68 371 IPR011009 -
Pral5780g00001 476 Pfam Protein tyrosine and serine/threonine kinase 97 370 IPR001245 GO:0004672|GO:0006468
Pral5780g00001 476 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 176 379 - -
Pral5780g00001 476 CDD STKc_IRAK 99 373 - -
Pral5780g00001 476 MobiDBLite consensus disorder prediction 401 454 - -
Pral5780g00001 476 ProSitePatterns Protein kinases ATP-binding region signature. 99 128 IPR017441 GO:0005524
Pral5780g00001 476 SMART serkin_6 93 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5780g00001 476 Coils Coil 411 431 - -
Pral5780g00001 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Pral5780g00001 476 PANTHER OS01G0588500 PROTEIN-RELATED 47 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5780g00001 Pral-Chr5780 17949 19884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5780g00001 68 370 Glycoside Hydrolase AT3G07070 50.000 5.26e-99 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral5780g00001 PK_Tyr_Ser-Thr 5.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5780g00001 - - gmx:100790454 617.076