Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5778g00020 ATGGAGATTGTCACGACCATTGCTGGAAAATTTGTAGAACCGATAGTAGGCTACACCGTGGCACCCCTTGGAAGGCAATTGGGTTATTTGATGTTCTACAAAGGCAATTTCAAGAATCTGAGGGATCAAGTAGAGGAGCTGAAGAGACTGAAGGAAACTATCAGTCATGAAGTGGAAGCAGAAAGAAGAAATGGACGGCAAATTTACGATGCTGTAAAGAACTGGCTAAATAGCGTAGATGAAATCATTGGAGCAGCAGAGGAACTTGGTGATGATCCTCGTCACAGGAACGTTGGCTGCTACAAGTGGCCTTTTCCTGATTTGAAGTCACGACATCACCTCAGTAGAAAAGCTAAGAAAATGGCTGGCAATGTTGTTGAATTAATGCAACGAAAAGATAACATTCGTCCATTCGCATTCTTACCTCCTCTAGAGGGAGTAGGCTCTACGTCTGCGACAAGTAGTGAGAAGCTTCAATCAAGAAAGAAAATGATGGAGGACATTGTCTTGGCTCTACGAGATCCCAACTTAAGCCGAATAGGAGTCTATGGGCTTGGCGGAGTGGGAAAAACCACTCTAGTTGAAGAAATTGCTAGAAAAGTTAAAAGCAAGCTGTTTGATGAAGTTGTTATGGTTAAGGCATCCCAAGTTGCAGATCTTGAAAGAATTCAGGGTCAAATTGCAGATTTTTTGGGTCTTCACTTTGAAGAGATGAGCATCAATGGAAGAGCAGATCGCCTCAAGCAGAGGATTAAAAATGAGAAAAGTATCCTGATCATATTGGATGATATTTGGCCAATGCTTGAATTAGAAAAGGTGGGAATTCCTCTAAATGACCACAAGGGTTGCAAGCTATTGTTGATTTCTAGAAATAAAGAAATACTAAAAACAATGGATACTGACGAAGATTTTCTGATAGATGTTTTAAATGAAGAAGAAGCTTGGAGCTTGTTTGAAGATATGGTGGGTGATGTTGTCAAAGAAGTTAGTTTACGTGATGTGGCAATCAAGGTGGCCCAAAAATGTGCAGGCTTGATTGTTCTTATAGTGACAGTGGCAAGAGCATTGAAAAATGAAGATAATCTTGATTCTTGGAAATATGCCTTGAACCAGCTAAAGACCGTTGATAAGAAAGGAATGAGTGAGAAAATTTATTCGGCTTTGGAGTTTAGTTACAATCATCTTCAGGGTGATGATGTGAAGGCATTTTTCTTGCTTTGTGGATTAGTTGGTCCACAAATTTCTGTTGAATGGTTGTTCAAATATGCCATAGGTTTAGGCATATTCAACCAAACTTATTCTGCAAAAGATGCAAGACTTGAACTTCACAGGTTGATTGGTTCCTTGAAGGCATCCTGTCTATTACTCGAAAACAACTCAAACATGGAAGTTAAAATGCATGATATTGTACATGAAGTGGCAGTCTCAATTGCTTCAAGAGATCAACATGCTTGCAAAATTGGAAGGGGAGATGAGTTATGGCCACCAGAGGAATCCCTTCAAAGATGCACTCAAATCAGCTTAGATGAGTGTCATATTCCTAAACTTCCTGAAAGGTTAGAGTGTCCTAACGTTAAACTTTTTCACTTGTTTAATAACAATGAATCTCTAAGCGTCCCAAATTCTTTCTTTGAGGGAATGAGAAACTTGAAGGTATTAGATTTGACTCGCCTGCACTTACCTTCATTACCCCAATCTTTTCATTCCCTTAGTGACCTTCAAACTCTTTGTTTGGATGGGTGTGCTTTGGAAGATATGACCAACATTGGAGCTTTAACGAATTTACAAGTTCTTAGCCTTTACAAATCATCTATGAGAACATTGCCCAGTGAACTAGGGCAATTGACTCATCTTAAAATGTTGGATTTGAGCCATTCAGGAATCGAAATCTTCCCGTCCAACATTATATCAAAACTGATCAAATTGGAGGAGTTGTATTTGGGGGATACTGCCATCAAGTGGGACCAAGAGGATTCAAATGAGGAAAATAAAAATGTTTCCCTTGCCGAACTTGGGTATCTAGCGAACTTGACTGCTCTAGAAATTCAAATCAAAGGGGCTTGGGTTCTACCAAGGAATATAATGTTTGACAAACTAGAAAGATACAAAATAGTGATAGGAGATGCTTGGGAATGGGCTGATAATCATGGGGCCTCCAAAATGTTGAAACTCAAGCTTGACAGTGTCATTCATTTGGAGCATGGGATTAAAGAACTTATTAAAGGAGTGGAGGATTTGTACTTGGATGAAGTAAATGGAATCTCCAATGTGCTTTACCATTTGAATGGAGAAGGATTTCCCTTGTTAAAGCATCTTCACATCCAAAATCATGGAAAAATTCAACACATCGTCAACTCAACGGAGAGAAAAAGAAGTCTTGTTTTCTTCCCAAAGATGGAGACATTACTACTTCAAAATCTCAATAAATTAGAGAAGATATGCCATGGCTCATTTATGAATAATTCATTTGCAAAACTTAGATCCGTCAGAGTCAAATATTGTGGCCAGTTGAAGTATCTCTTTTCAACGCTGATGGTCAAAGCCCTTTGCCAACTTGATGAGATTGAAGTTTCAGAATGTAATTCTATGAAAAAGATTGTGTTTATAGAAAATTCTTTGCCAAACTCAGAAACTGTTGATGACAATATTGAGTTTTGTTCATTGCGATCCTTAACTTTGCAATATCTACTAGCCATTGAGGATTTCTACTCTGGTTTGTCGACATTTTCATCAACAACCATGCAGAGTTCGTCGTCGTACATTCACGCTTCATCATCTTTTTTTAGTGGAAAGGCTAAGTTTTCTAATTTGGAGACTCTAAAGTTGAGTGCAATCTATCTAGAAAATATTTGGCAAGATGATCACCTTTCTATAGCCAATTCTTTTCACAAGCTGGCTAAACTAAGTGTCGAGAAGTGCAGTGGTTTGAAGTATTTATTCTCATCGTCTATGGTTCAAAGTTTTCCAAACCTTAAGGAGCTTGAAATAAGAGAGTGTGAGATGATGGAGGAGATAATTAGTACAGAGGGGAGAAATGGCACTGGAATAGAAGAGGTTGGGCTTCTAAAATTGGAGACTATCGTAATCAGCCACATGAAAAGGTTAAAGAAAGCATGGCATTCCCAATTTGATGGGTTGAAGACTATGAAGGTCAATAATTGTGAGAAACTTGAGAATATTTTCCCAGATATGCACACAACATTGGGAAGAATAGAGACGTTGATGGTTAGTGATTGTGGCTTAGTGAAAGAGATATTCAAATTACCTGCCAATGAAATCAATAATGGGGACGACACAAGAACACAAGTCACACAATTGAAAAAACTCCATCTGCGCCGCTTGCCAAAGTTGAAACAAATATGGAGTAAGGATCCCCAAGGAAATTTCTGCTTTCATAATCTCCAAGATGTCTATGTTGGAGGTTGTCTAAAGTTAGAACATCTCTTCCCATTTTCAATAGCGCTGGAACTTCAACAACTTGAACGACTCACAGTGGATTATTGTGGAATGAATAAAATTGTCGCGAAGAAACAGGGACCAATGGAGGAAAAAGCCATATTTCACTTTGATCGATTATACTTTTTGGAGATTAAGAACATGTATGAACTTGATAGGTTTTATGGTGAAAATCACAGTTTAACCTGCCCATCACTGAGAATGCTATGGGTCTTCAACTGTGCAAAATTGAAGTTATTCGGGAGACACAATACAAGCAACCATAGAGAGACTGCTGATGGCCAAAATCCGCATCCCACCCAACAACATCTCTTCGTAGTTGAAGAGGTGATTCCACAGTTGGAACTGTGTACATTACATAATGAAGAGGCTATAATGATGTTGCAAGACCCACAATGGAAGGACCATGGTCTGAGTAAATTGAAGACACTTCGACTGTCCTATTTTGAGGACAAAACAGCAGCAACTTTTTTAGACTCAATTGTGCAGAAGGCACCAAGTTTGAAATCTCTAACTGTTCAACATAGTTCCTTGAAAGAGATATTCCGAGACAAAAGAGTTCCATATAAGGAAGGCAAAAACAAAATTAACACCCAGCTTGAATATCTAAGATTAGATTACCTACAATTGCAACACATATGTAGAGAAGGATGCAATATCGATCCCATCCTTGAGGCTCTTGAAGTTTTATATGTGACGGAATGTGGCAATTTGAAAACTTTGGTTCCTTCCTCCGTCACTTTTTCCCACTTGACATATTTGAAGATCATGGAATGTAATGGATTGATGAACTTAATTTACTCATCAACTGCAACAAGTTTGGTCAATCTGGAAGACATAACATTAAAAGAATGCAATTCACTTGAAGAAGTAGTGACGCAGGGGATGAACGAGGCAAGAGATGAAATAGTGTTCAGACGTTTAAGAACTTTAGTGTTGGAAAGCTTGCCAAGGCTCAACAGTTTTTCATCTAGTCAGTTCTTCTTCAGGTTCCCCTTGTTGAAGAAAGTTGTTATGAGACAATGTCCAAGGATGAAAACCTTCTGTGAAAGAGCAGCAAGCACACCAATGCTTAAAAAGGTCATAACAAAAGATGGGAAAGATGAAGAATGGTGGTGGGAAGGTAACTTGAATGGAACAATAAAAAAAATCTATGTGGATAAGATTGCATTTCGTGACATGGAGCATCTTCGTTTATCCTTGTATCCTGATCTAAGAGATTCTTGGAACAGTCCCGTTGAGAACAAAGTATTCTGTAATTTGAAATCTCTAGTGGTGGAAAATTGTAACTTCTTGTCAGATGTTCTTATTCCTGCAAATTTTCTACGAGCCTTGGGGAAGTTGGAAGAAATTCAAGTGAGAGACTGTGATTCACTTGAAGCTGTGATTGAATTTGACAATGCAAAAGAAGAGGCAGAATCAGATAAAGAGACCAGTCATCTGCGAAAAATCTGCCTATCTAATCTGCCTAAACTCCAATACATGTGGAAGCCAAGCCTTGGAGGGAAAAAAGAAGAGGATGAAGTTGAAATCCAACGTCAAAAGGTACTTCTACCCAAACTAGAAACAATAATAATAGAAGACTTGCAAAACCTGGAGACAATATGGCACCCTATCCTAACTCCGAATTCCATGGGCAGCTTTGAGACATTGAAAGTGAAAAATTGTCAGAAAATTCAGCATATATTTCCAATATACATGCACGGAGCATTTGCAACACTAGAGACACTGATGCTTGAAAACTGCAACTTAGTGGAGGAAATTTTCCAGCTGGGTGTCCGTGAAATGTGCTGTGGAGATGATACAACGCGACTCAAGAATATAACCATACTTCGACTGCCAAAGCTGAAACAAATTTGGAGGAGAGATCCTCAATCAAGTCTTTATTTTAAGAGTCTACAAGTTGTGCGAGTTGAAGAATGTGGAAATTTAGAGTACCTTTTTCCATTCTCCATAGCTAAGCACCTACCTCAAGTTGAAGCAATTACAATAAAGAATGCTGAAAAGATGAAGGAAATTGTTTCCAAGAGAGAAGAACCCTTAGACAATGGTGTGAAATTTGAATTTAATCAGCTAACCTCAATTGTGCTTTGGAATTTACAAGAATTGCAGAGATTTTGTGCCGGAAATCATAGCTTATCTTGTTCATCATTGAAAGAATTAGATGTTTACAAGTGTGAGAAATTAAAGTTGTTCAAGACACAAGGTGCAAGCAGCCAAGAAAGACTTTCTAACAACAATCTCCATGTCTCAAAGCAACAGCCTCTTTTTACACTCGAAGAGGTGATTGACAACTTAGAGATCTTGAGTTTGGGCAATGAGCATGCAAGCATGATATTCCAATCGCAAGTTCCACGAGATCATCAATTTCACAAACTCAACTTTCTGCGGTTCTATGAATTAAAAGATGCTCATGCTACTTCCTTATATTGGTTTCTCCAAAATATACCCAGTCTGGAATGGCTAGTCATTCGAGAAAATGCTTTCAAGGTGATATTCCCAGACGAAACGCCTCGAGATGAGAAAGGAGAAATTGATATTAAAACACGACTCAAGAAGCTAACGCTATGTAAATTGCATGGACTCCAGCACATATGCAGAGAAGGATGCCAATTGGATCAGGTTCTTGATGTTCTAGAATACCTACATGTGAAAGAATGTTCCAATTTGAAGCACTTGGTGCCTTCCTCAGTAACTTTTAATCACCTAACATATTTAGAGGTGCAAAATTGCAGTGGATTGATGTATTTAATGACCTCTTCAACAGCAAGAAGTATGATTCAGTTAGCAACATTGAAGATAAGAGAGTGTGATTCAGTTGACCAAATTGTGGCTGAAGAGGGTGGGGAGAGCATAAATGAAATTGTTTTCAACAGTCTAACAGTTCTAGAAATTGATAGTTTGCCTAAACTCCAAATGTTTTGCTCTAGTAACTGCTTGTTGAAGCTTCCATTGTTGAAGAAACTTGTAATAAAGCGATGTCCAAGAATGACTAGCTTTTCTGCAAGGGAAATAAGTGCACCCATGCTTCAAAAGATACTGACAGAGGAACAAGATGAAATGTGGTGTTGGGAAGGTGATCTTACTAGAACAATCAGCAAGATGTTTCAAGATATGAGTGCGAGCACAAGCAGAGCATTGAGCTCCGTGGAAGATGGAGAAAAATCAAGGGCTAACAAGATTGATGATTCAGGGACGCAAGAAATGCACAAACTTCCAATTCCACATGCAGCCATTAGGACTGAAGAGATGAATGAGACCACTCAAACACCGTTAGCTGAGGCTGATGAAAGCACATTAACTCAGACCTCTGTTCAACAAACAGGTATATTCTGTGGTTCCTATTTGCCATAA 6810 0.3863 MEIVTTIAGKFVEPIVGYTVAPLGRQLGYLMFYKGNFKNLRDQVEELKRLKETISHEVEAERRNGRQIYDAVKNWLNSVDEIIGAAEELGDDPRHRNVGCYKWPFPDLKSRHHLSRKAKKMAGNVVELMQRKDNIRPFAFLPPLEGVGSTSATSSEKLQSRKKMMEDIVLALRDPNLSRIGVYGLGGVGKTTLVEEIARKVKSKLFDEVVMVKASQVADLERIQGQIADFLGLHFEEMSINGRADRLKQRIKNEKSILIILDDIWPMLELEKVGIPLNDHKGCKLLLISRNKEILKTMDTDEDFLIDVLNEEEAWSLFEDMVGDVVKEVSLRDVAIKVAQKCAGLIVLIVTVARALKNEDNLDSWKYALNQLKTVDKKGMSEKIYSALEFSYNHLQGDDVKAFFLLCGLVGPQISVEWLFKYAIGLGIFNQTYSAKDARLELHRLIGSLKASCLLLENNSNMEVKMHDIVHEVAVSIASRDQHACKIGRGDELWPPEESLQRCTQISLDECHIPKLPERLECPNVKLFHLFNNNESLSVPNSFFEGMRNLKVLDLTRLHLPSLPQSFHSLSDLQTLCLDGCALEDMTNIGALTNLQVLSLYKSSMRTLPSELGQLTHLKMLDLSHSGIEIFPSNIISKLIKLEELYLGDTAIKWDQEDSNEENKNVSLAELGYLANLTALEIQIKGAWVLPRNIMFDKLERYKIVIGDAWEWADNHGASKMLKLKLDSVIHLEHGIKELIKGVEDLYLDEVNGISNVLYHLNGEGFPLLKHLHIQNHGKIQHIVNSTERKRSLVFFPKMETLLLQNLNKLEKICHGSFMNNSFAKLRSVRVKYCGQLKYLFSTLMVKALCQLDEIEVSECNSMKKIVFIENSLPNSETVDDNIEFCSLRSLTLQYLLAIEDFYSGLSTFSSTTMQSSSSYIHASSSFFSGKAKFSNLETLKLSAIYLENIWQDDHLSIANSFHKLAKLSVEKCSGLKYLFSSSMVQSFPNLKELEIRECEMMEEIISTEGRNGTGIEEVGLLKLETIVISHMKRLKKAWHSQFDGLKTMKVNNCEKLENIFPDMHTTLGRIETLMVSDCGLVKEIFKLPANEINNGDDTRTQVTQLKKLHLRRLPKLKQIWSKDPQGNFCFHNLQDVYVGGCLKLEHLFPFSIALELQQLERLTVDYCGMNKIVAKKQGPMEEKAIFHFDRLYFLEIKNMYELDRFYGENHSLTCPSLRMLWVFNCAKLKLFGRHNTSNHRETADGQNPHPTQQHLFVVEEVIPQLELCTLHNEEAIMMLQDPQWKDHGLSKLKTLRLSYFEDKTAATFLDSIVQKAPSLKSLTVQHSSLKEIFRDKRVPYKEGKNKINTQLEYLRLDYLQLQHICREGCNIDPILEALEVLYVTECGNLKTLVPSSVTFSHLTYLKIMECNGLMNLIYSSTATSLVNLEDITLKECNSLEEVVTQGMNEARDEIVFRRLRTLVLESLPRLNSFSSSQFFFRFPLLKKVVMRQCPRMKTFCERAASTPMLKKVITKDGKDEEWWWEGNLNGTIKKIYVDKIAFRDMEHLRLSLYPDLRDSWNSPVENKVFCNLKSLVVENCNFLSDVLIPANFLRALGKLEEIQVRDCDSLEAVIEFDNAKEEAESDKETSHLRKICLSNLPKLQYMWKPSLGGKKEEDEVEIQRQKVLLPKLETIIIEDLQNLETIWHPILTPNSMGSFETLKVKNCQKIQHIFPIYMHGAFATLETLMLENCNLVEEIFQLGVREMCCGDDTTRLKNITILRLPKLKQIWRRDPQSSLYFKSLQVVRVEECGNLEYLFPFSIAKHLPQVEAITIKNAEKMKEIVSKREEPLDNGVKFEFNQLTSIVLWNLQELQRFCAGNHSLSCSSLKELDVYKCEKLKLFKTQGASSQERLSNNNLHVSKQQPLFTLEEVIDNLEILSLGNEHASMIFQSQVPRDHQFHKLNFLRFYELKDAHATSLYWFLQNIPSLEWLVIRENAFKVIFPDETPRDEKGEIDIKTRLKKLTLCKLHGLQHICREGCQLDQVLDVLEYLHVKECSNLKHLVPSSVTFNHLTYLEVQNCSGLMYLMTSSTARSMIQLATLKIRECDSVDQIVAEEGGESINEIVFNSLTVLEIDSLPKLQMFCSSNCLLKLPLLKKLVIKRCPRMTSFSAREISAPMLQKILTEEQDEMWCWEGDLTRTISKMFQDMSASTSRALSSVEDGEKSRANKIDDSGTQEMHKLPIPHAAIRTEEMNETTQTPLAEADESTLTQTSVQQTGIFCGSYLP 2269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5778g00020 2269 PRINTS Disease resistance protein signature 251 265 - -
Pral5778g00020 2269 PRINTS Disease resistance protein signature 179 194 - -
Pral5778g00020 2269 PRINTS Disease resistance protein signature 613 629 - -
Pral5778g00020 2269 Pfam Leucine rich repeat 524 583 IPR001611 GO:0005515
Pral5778g00020 2269 Gene3D Ribonuclease Inhibitor 1542 1839 IPR032675 -
Pral5778g00020 2269 Gene3D Ribonuclease Inhibitor 491 882 IPR032675 -
Pral5778g00020 2269 SUPERFAMILY L domain-like 465 880 - -
Pral5778g00020 2269 SMART AAA_5 176 319 IPR003593 GO:0016887
Pral5778g00020 2269 SUPERFAMILY L domain-like 1285 1807 - -
Pral5778g00020 2269 MobiDBLite consensus disorder prediction 2202 2221 - -
Pral5778g00020 2269 SUPERFAMILY RNI-like 1776 2164 - -
Pral5778g00020 2269 Gene3D Ribonuclease Inhibitor 883 1093 IPR032675 -
Pral5778g00020 2269 Gene3D Ribonuclease Inhibitor 1094 1244 IPR032675 -
Pral5778g00020 2269 Gene3D Ribonuclease Inhibitor 1264 1517 IPR032675 -
Pral5778g00020 2269 Gene3D Ribonuclease Inhibitor 1939 2160 IPR032675 -
Pral5778g00020 2269 Gene3D - 308 396 IPR042197 -
Pral5778g00020 2269 Coils Coil 30 64 - -
Pral5778g00020 2269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 407 IPR027417 -
Pral5778g00020 2269 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1284 1511 - -
Pral5778g00020 2269 Pfam NB-ARC domain 162 393 IPR002182 GO:0043531
Pral5778g00020 2269 Gene3D - 148 306 IPR027417 -
Pral5778g00020 2269 MobiDBLite consensus disorder prediction 2196 2222 - -
Pral5778g00020 2269 SUPERFAMILY L domain-like 876 1233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5778g00020 Pral-Chr5778 344770 355794 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5778g00020 180 632 WRKY Transcription Factor Family AT5G45050 22.973 1.91e-11 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5778g00020 - - tpra:123888073 1654.03