Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5778g00019 ATGGAGATTGTCACGACTGCTGTGGGGAAAGTCGTAGAACCGATAATAGAATACACTGTGAAAGCCACTGCTAGGCAAGTGGGTTATTTGATTTTCTACAAAGACAACTTCAAGAACCTCGAGAATCAAGTTGCGGACCTGAAAGGTGCAAAGGGCACAATCAATCGTGAAGTGGAAGTAGACAGAAGAAATGGACGAAAAATTCACGATGCTGCACAGAAGTGGCTAGACAGAGTGGATGAAATCGTAGAAGCAGCAGAGCAACTTGGTGAGGATCCTCGTCGTAAGAATGCTGGTTGCTGCAATGGGCCTTTTGTTGATTTAAAGTCACGGCATCAACTTAGTAGAAAAGCAAAGAAGATGGCTGTAAACGCTACTGAAGTGATGGAAGCAAAAGATAACATCGGTCCACTTACATACTTGCCTGCTCTAGAGGGAGTGGGCTCCGCCTCTGCTACAGGCAGTGAAAAGCTTCAATCAAGAAAGAAAATGAAGGAGGACATTGTCTTGGTATTAAAAGACCCCAACTTAAGGCGAATAGGGGTCTATGGGCTGAGCGGAGTGGGAAAAACCACTCTTGTTGGAGAAATTGCCAAACAAGTTAAAGATGACAAGTTGTTTGATGAAGTTGTTATGGCTAATATATCCCAAATTGCAGATCTCGAAAGAATTCAAGATGAAATTGCAGATATTTTGGGTCTTCGCTTTGAGGAATCGAGCATACTTGGAAGAGCATCTCGCTTGAGGCAGAGGATTAAAGATGAGAAAAGTATCCTAGTCATATTGGATGATATTTGGGATGTACTTGAACCACATAAGCTTGGAATTCCTCTGAATGATCATAAGGGCTGCAAGCTATTGATGACTTCTAGAAATCTAGAAATATTACAAAATATGGAGACTCAAAAAGACTTCATGATAGATATTTTAAATGAAGATGAAACTTGGAGCTTGTTTGAAGATATGGTGGGTGACGTTGTTAAAGATATTAGCTTACATGATGTGGCAACCCAAGTGGCCCAAAAATGTGCTGGCTTGATTGTTCTCATAGTGGCAGTGGCAAGAGCATTAAAAAATAAATACGATTTTGATTCTTGGCAAGATGCCTTGAACCAGGTAAAGACGGTTGATAAGGAAGGGATGAATGAGAAAATTTATTCGGCTTTGGAGTTCAGCTACAATCATCTTGAAGGCGATGATGTGAAAGCACTTTTCTTGCTTTGTGGATTATTAGGTCCACAAATTCATGTTAAAGACTTGTTGACATATGCTATGGGTTTGGGCACATTCAGGCAAATTTATAGTCCAAAAGATGCAAGAATTAAACTTCACAGGTTGATTGGTTCCTTGAAGGCATCTTGTTTGTTGCTCGAAAACAACTCAAACAACAAAGTTAAAATGCATGATATTGTGCATGAAGTATCGGCCTCAATCGCTTTTAGAGATCAGTATGTTTGCAAAATTAGAGGGGGTGATGAGCTGAAAAAATGGTCATAA 1497 0.4015 MEIVTTAVGKVVEPIIEYTVKATARQVGYLIFYKDNFKNLENQVADLKGAKGTINREVEVDRRNGRKIHDAAQKWLDRVDEIVEAAEQLGEDPRRKNAGCCNGPFVDLKSRHQLSRKAKKMAVNATEVMEAKDNIGPLTYLPALEGVGSASATGSEKLQSRKKMKEDIVLVLKDPNLRRIGVYGLSGVGKTTLVGEIAKQVKDDKLFDEVVMANISQIADLERIQDEIADILGLRFEESSILGRASRLRQRIKDEKSILVILDDIWDVLEPHKLGIPLNDHKGCKLLMTSRNLEILQNMETQKDFMIDILNEDETWSLFEDMVGDVVKDISLHDVATQVAQKCAGLIVLIVAVARALKNKYDFDSWQDALNQVKTVDKEGMNEKIYSALEFSYNHLEGDDVKALFLLCGLLGPQIHVKDLLTYAMGLGTFRQIYSPKDARIKLHRLIGSLKASCLLLENNSNNKVKMHDIVHEVSASIAFRDQYVCKIRGGDELKKWS 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5778g00019 498 Gene3D - 150 308 IPR027417 -
Pral5778g00019 498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 408 IPR027417 -
Pral5778g00019 498 Coils Coil 30 57 - -
Pral5778g00019 498 Gene3D - 310 399 IPR042197 -
Pral5778g00019 498 SMART AAA_5 176 313 IPR003593 GO:0016887
Pral5778g00019 498 Pfam NB-ARC domain 162 394 IPR002182 GO:0043531
Pral5778g00019 498 PRINTS Disease resistance protein signature 179 194 - -
Pral5778g00019 498 PRINTS Disease resistance protein signature 252 266 - -
Pral5778g00019 498 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 25 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5778g00019 Pral-Chr5778 306137 307633 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5778g00019 156 490 WRKY Transcription Factor Family AT5G45050 25.072 2.19e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5778g00019 - - pcin:129288189 613.609