Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5778g00009 ATGGAGATTGTTTCGTCCATTGTTGCAAAAGTTGCAGAGCCGATAGTAGACTACACCGTGGCACCCATTGCAAGGCAAGTGGGTTATTTGATTTTCTACGAAGACAATTTCAAGAATCTCAAGGATCAAGCTGCGGTGCTGAAGAGAGCAAAGGACACTATTTGTGATGAAGTGGAAGCAAAAAGAAAAAGTGCACATCAAATTTGTGATGATGCACAGAACTGGTTGAACAAAGCGGATAAAATTATAGAAGAGGTAGAGAAAGTTGGTAATGATCCTTGTCATAAGAATGCTGGTTGCTGCAGGTGGCCTTTTCCTGATTTAAAGTCACGACATCAACTGAGTAGAAAAGCAAAGAAGATGGCTGGAGACGTTGCTGAAGTAATGCAGGGAAAAGATAACATTCGTCGACTTACATTCTTGCCTGATCTAGAGGTAGTAGGCTCCACTTCTGCTGCAAGCATTGAAAAGCTCGGGTCAAGAAAGAAAATGAAGGAGGAAATTATCTTGGCCCTCAAAGACCCCAACTTCAGCCGGATCGGGGTCTATGGGCTTGGCGGAGTGGGGAAAACCACTCTAGTTGAAGAAATTGCCAGGCAGGTTAAAGATCACAAGTTGTTTGATGAAGTTGTTATGGTTAATATATCCCAAACTGCAGAACTTGAAAGAATTCAACGTGAAATGGCAGATCTTTTGGGTCTTCGGTTTGAGGAGACGAGCATACCTGGAAGAGCATTCCGCCTCAGGCAAAGGCTTACATATGGGAAGAGTATCCTCGTCATATTGGACGATATTTGGGATGTACTCAAATTAGAAAAGCTTGGAATTCATTTGAATGATCAGAAGGTTTGCAAACTATTGTTGACTTCTAGAAATCAAGAAATATTACGGAAAATGAAAACTCAAAAAGATTTCTTGATAGATGTTTTAAATGAAGATGAAGCTTGGATATTGTTTGAAGATATGGTGGGTGATGTTGTTAAAGATGTTAGTTTGCATGATGTGGCAATCCAAGTAGCTCAAAAATGTGCAGGATTGGTTGTTCTTATAGTGACAGTGGCAAGAGCATTAAAAAGTAAAGATGATATTGATTCTTGGAAAGATGCCTTAAACCAGCTAAAGACTATTGATAACGAAGGGGTGAATGAGAAAATCTATTCGGCTTTGGAGTTCAGCTACAATCATCTTGAAGGTGATGATGTGAAGGCGCTTTTCTTACTTTGTGGATTATTAGGTCCACAAATTTGTGTCGATGACTTGTTGACATATGGTATGGGTTTGGGCATATTCAAGCAAATCTATACTCTAAATGATATAAGACGTCAACTTCATAGGTTAATTGGTTCTTTAAAGGCATCCTGTCTATTGCTTGAAAACAACTCAAACCAGAATGTTAAAATGCATGATGTTGTACATGAAGTAGCAGTCTCAATTGCTTCAAGAGATCAACATGTTTGCAAAATTAGAATGGGTGATGAGCTGGGAAAATGGCCGTCAGAGGAATTCTTTCAAGGATGCACTCAAATCATGTTAGACAGGTGTTACATTCCAAAGCTTCCTGAAAGGTTAGAGTGTCCAAATATTAAACTTTTCTGCTTGGATAATACGAATGAATCTTTAAGTGTTCCAGAATCTTTTTTTGAGGGAATGAAAAACCTCAAAGCATTAGGTTTTTCCGGCATGCATTTACCTTCATTGCCTCAATCTTTTCATTCTCTCATTGACCTTCGAGCACTTTGTTTATATGGTTGTACTTTGGGAGACATGACTAATATTGGAGCTTTAACAAATTTGAAAATTCTCAACCTTAACGGATCATCTATGACAACATTGCCTAAGAAACTAGGGCAATTAACTCAACTTAAGATGTTGAATTTGACTGATTCTGGAATTGAAATCTTCCCTCCCAACATTATATCAAACTTGACCAAATTGGAGGAGTTGTATTTGGGCAGTACGTCCATCAAATGGGACCAAGGAGATTTAATTGAGGACAACAAAAATGCTTCGCTTTCTGAACTTAGGCATTTGACAAACTTGACTATTTTAGAAATTCAAATCAAAGGGGCTTGGGTTCTGCGAAGGGACATAATGTTTGACAAACTGGAAAGATACAAAATAGTGATAGGAGACTTCTGGGAATGGTCTGATAATTATGGGGCCTCCAAAATATTGAAGCTCAAGCTTGCTACTGTCATTCATTTGGAGCATGGGGTTAAAGAACTTATTAATAGAGCAGAGGATTTGTACTTGGATGAAGTAAATGGAATCTCTGATGTGCTTTACCATTTGAATGGGGAAGGATTTCCTTTGTTAAAGCACATTCGCATACAAAATAACGGGGAAATTCAACACATCATTAACTCAATGGAGAGAAAATTAAGTCATGTTTTCTTCCCAAAATTGGAGGCATTAACACTTCAGAATCTAAATAAATTGGAGAACATATGTCATGGCTCATTTGCAAAAAATTCGTTTGCAAAACTTAGATACATCAAAGTCAAATGTTGTGACCAGTTGAAGTATCTCTTGTCAATGTTGATGGTCAAAGCTCTTTGCCATCTTGATGAGATTGAAGTTTCAGATTGCAATTCTATGAAGGAGATTGTGTTTATAGAAAATTCCTTCCCAAACTCTGTAACTGTTGATGACGATAATGAGTTTTGTTCATTGCGATCCTTGACATTGCGATATCTGCCAGCCATTGAGGGTTTCTACTGTGGTATGTTGACGTCTTCAACAACAACCAAGCAGAACTTGTCATCCCACACTAATGTTCCGTCATCTTTTTTTAATGCAAAGGTTAAGTTTTCTAATTTGGAGACACTAAAGTTGAGTTCAATCCATCTACGTAATATATGGCACGATGATCGCCTCTTTGTAGCCAATTCTTTTCACAAGTTGGCTAAACTGAGTGTTGAGAACTGTAACAGCTTGAAGTATTTATTCTCGGCTTCAATGGTTGGGCTTCCAAAATTGGAGGCTGTCGTAATAAGCAACATGAAAAGGTTAAAGAAAGTATGGCACTCCCAATTTGATGGGCTCAAGACTATGGAGGTGAATAATTGTGAGAAACTTGAGAATATTTTCCCATCTGATATGCACACAACATTTGAAAGAATGGAGACATTGAAGGTCAGTGATTGCTATTCTGTGAAAGAGATATTCCAATTACCTGCCAATGAAGAGGACACAAGGCAGACACAAGTCACACAATTGAAGAAACTCTATCTACTTCGCTTGCCCAATTTGAAACAGATATGGAGTAAGGATCCCCAAGGAACCTTCCGCTTTCATAATCTCCAAGATGTCCATGTTGAAGACTGTGCAACTTTAGAATATCTCTTCCCATTTTCAATAGCCCTGGATCTTGACCATCTCGAACAACTCACATTGAAATTTTGTGAAATGGATGCAATTGTAGCAAACAAGGAAGGACCTATGGAGGATGAAGCCATATTTCACTTTGATCGATTATACTACTTGCAGATTTGGAGCATGCGTCAACTTGACAGGTTTTATAGTGGAAGTCACAGTTTAATGTGCCCATCATTGAGAATTTTAGATGTCTTAGGATGTGCGCAATTGAAGCTATTGGGGAGGCAGAGTACAATTAACCAAAGAAAGAATGGTGATGACCAGAATTCGCATCTCTACTTTGCGCAACAACCTCTCTTTGTAATTGAAGAGGTGATTCCTAAGTTGGAAGAGTTGACATTAAATAACAAGGACGCCAAATTGATGTTGATAGACCCACAGTGGAAGGACCACTATTTGAGTAAATTGAAGCGTCTTCGAATGTCCAATTTTGATGATAAACTAGCAGCAACTTTTCTTGACTCGATTGTACAAAAGGCACCAAACTTGAAAGATCTAATTATTGAACATAGTTCCTTAAGGAAGGATGCAAAATCGACCCAATTCTTGAGGTTCTTGAAGTTTTATGTGTTGAAAAATGTGCCAATTTGA 3969 0.3825 MEIVSSIVAKVAEPIVDYTVAPIARQVGYLIFYEDNFKNLKDQAAVLKRAKDTICDEVEAKRKSAHQICDDAQNWLNKADKIIEEVEKVGNDPCHKNAGCCRWPFPDLKSRHQLSRKAKKMAGDVAEVMQGKDNIRRLTFLPDLEVVGSTSAASIEKLGSRKKMKEEIILALKDPNFSRIGVYGLGGVGKTTLVEEIARQVKDHKLFDEVVMVNISQTAELERIQREMADLLGLRFEETSIPGRAFRLRQRLTYGKSILVILDDIWDVLKLEKLGIHLNDQKVCKLLLTSRNQEILRKMKTQKDFLIDVLNEDEAWILFEDMVGDVVKDVSLHDVAIQVAQKCAGLVVLIVTVARALKSKDDIDSWKDALNQLKTIDNEGVNEKIYSALEFSYNHLEGDDVKALFLLCGLLGPQICVDDLLTYGMGLGIFKQIYTLNDIRRQLHRLIGSLKASCLLLENNSNQNVKMHDVVHEVAVSIASRDQHVCKIRMGDELGKWPSEEFFQGCTQIMLDRCYIPKLPERLECPNIKLFCLDNTNESLSVPESFFEGMKNLKALGFSGMHLPSLPQSFHSLIDLRALCLYGCTLGDMTNIGALTNLKILNLNGSSMTTLPKKLGQLTQLKMLNLTDSGIEIFPPNIISNLTKLEELYLGSTSIKWDQGDLIEDNKNASLSELRHLTNLTILEIQIKGAWVLRRDIMFDKLERYKIVIGDFWEWSDNYGASKILKLKLATVIHLEHGVKELINRAEDLYLDEVNGISDVLYHLNGEGFPLLKHIRIQNNGEIQHIINSMERKLSHVFFPKLEALTLQNLNKLENICHGSFAKNSFAKLRYIKVKCCDQLKYLLSMLMVKALCHLDEIEVSDCNSMKEIVFIENSFPNSVTVDDDNEFCSLRSLTLRYLPAIEGFYCGMLTSSTTTKQNLSSHTNVPSSFFNAKVKFSNLETLKLSSIHLRNIWHDDRLFVANSFHKLAKLSVENCNSLKYLFSASMVGLPKLEAVVISNMKRLKKVWHSQFDGLKTMEVNNCEKLENIFPSDMHTTFERMETLKVSDCYSVKEIFQLPANEEDTRQTQVTQLKKLYLLRLPNLKQIWSKDPQGTFRFHNLQDVHVEDCATLEYLFPFSIALDLDHLEQLTLKFCEMDAIVANKEGPMEDEAIFHFDRLYYLQIWSMRQLDRFYSGSHSLMCPSLRILDVLGCAQLKLLGRQSTINQRKNGDDQNSHLYFAQQPLFVIEEVIPKLEELTLNNKDAKLMLIDPQWKDHYLSKLKRLRMSNFDDKLAATFLDSIVQKAPNLKDLIIEHSSLRKDAKSTQFLRFLKFYVLKNVPI 1322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5778g00009 1322 Gene3D Ribonuclease Inhibitor 921 1320 IPR032675 -
Pral5778g00009 1322 Pfam Leucine rich repeat 596 654 IPR001611 GO:0005515
Pral5778g00009 1322 SMART AAA_5 176 313 IPR003593 GO:0016887
Pral5778g00009 1322 Gene3D Ribonuclease Inhibitor 456 703 IPR032675 -
Pral5778g00009 1322 Pfam NB-ARC domain 162 394 IPR002182 GO:0043531
Pral5778g00009 1322 Gene3D - 147 308 IPR027417 -
Pral5778g00009 1322 Gene3D - 309 397 IPR042197 -
Pral5778g00009 1322 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 408 IPR027417 -
Pral5778g00009 1322 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1041 1198 - -
Pral5778g00009 1322 SUPERFAMILY L domain-like 876 1199 - -
Pral5778g00009 1322 SUPERFAMILY L domain-like 466 905 - -
Pral5778g00009 1322 Coils Coil 30 50 - -
Pral5778g00009 1322 Gene3D Ribonuclease Inhibitor 726 920 IPR032675 -
Pral5778g00009 1322 PRINTS Disease resistance protein signature 252 266 - -
Pral5778g00009 1322 PRINTS Disease resistance protein signature 179 194 - -
Pral5778g00009 1322 PRINTS Disease resistance protein signature 593 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5778g00009 Pral-Chr5778 184978 190509 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5778g00009 155 638 WRKY Transcription Factor Family AT5G45050 22.222 8.49e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5778g00009 - - pcin:129288116 1133.24