Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5778g00008 ATGGAGATTATTGCCACGACCATTGCTGAAAAAGTTGCAGAACCGATAGTAAACTACACTGTGGCACCTATTGCAAGGCAAGTGGGTTATTTGATTTTCTACAAAGACAATGTCGATAATCTCAAGAATCAAGTTGAGGAGCTGAAGAGAGTAAAGGACACTATCAGTCATGAAATGGAAACAGAAAGAAGAAATGGACGACAAATTTATGATGCCGCACAGAACTGGCTGAACAGAGTGGATGAAATTGTAGAAGCAGCAGAGCAACTTTGTGGCGATCGTCGTCATAGGAATGTCAGTTGCTGTAAGGGCCCATTTCCTGATTTAAAGTCGCGCCATCAACTCAGTAGAAAATCAAAGAAAATGGTTGGAGATGTTGATAGAGTAATGCAAGGAAAAGATAACATTGGTCCACTTGCATTTTTGCCTGGTCTAGAGGGAGCAGGCTCCACTTATGCTACAGGTAGTGAAATGCTTCAGTCAAGAAAGAAAATGAAGGAGGATATTGTCTTGGCTCTAAGAGACCCCAACTTAAGCCGAATAGGAGTCTATGGGCTTGGCGGAGTGGGAAAAACCACTCTAGTTAAAGAAATTGCCAAACAAGTTAAAGATGACGAGTTGTTTGATGAAGTTGTTATGGCTAATATATCCCAAGCTGCCGATCTTGAAAGAAGTCAATGTGAAATTGCAGATCTTTTGGGTCTTCGCTTTGAAGAGACGACCATAGTTGGAAAAGCATTTCGCCTCAGGCAGAGGATTGAAAATGAGAGAAGTATCCTAGTCATATTGGATGATCTTTGGGATGTGCTTGAGTTAGATAACCTTGGAATTCCTCTAAATGATCAGAAGGGTAGCAAGCTATTGTTGACTTCTAGATATCTAGATATATTACAAAAAATGAAGACTCAAAAAGATTTCTTGATGGAGGTTTTAAATGAACAAGAATCTTGGAGGTTGTTTGAAGACATAGCGGGTGATGGTGTTAGGGATGTTAGTTTACGTAATGTGGCAATTCAAGTGGCCCAAAAATGTGGAGGCTTGATTGTTCTTATAGTGACAGTAGCAGGAGCATTAAAAAATGATGATAATATTGAATCTTGGAAATATGCCTTAAACCAGCTCAATATTGTTGATAAGGAAGGAATGAATGAGAAAATTTATTCGGCTTTGGAGTTTAGTTACAATCATCTTAAGGGTGATGATGTCAAGGCACTTTTCTTGCTTTGTGGATTACTAGGTACCCAAGTTAATGTTGCAGACTTGTTGAAATATGCTATGGGTTTGGGAACATTCAAGCAAACTTATACTTTAAAAGATGCAAGAGTTAAAGTTCACAAGTTGATTGCTTCCCTAAAGGCTGCTTGTCTATTGCTCGAAAACAACTCCAACAAGGAAGTTAAAATGCATGACATTGTACATGAAGTAGCAGTCTCAATCGCTTCAAGAGATCAACATGTTTGCAAAATTCGAAGGGCTGATGAGCTTTGGCCATCCAATGAATTTCTTCAAAGATGCAATCAAATCATCTTAAAAGGGTGTCACATTCCTAAGCTTCCTGACAGGTTAGAATGTCCTAATGTTAAACTTTTCCACTTGTCTAATAAGAACGACTCTTTAAGTGTCCCAGATTATTTCTTTGATGGAATGAAAAAACTCAGAGTATTAGATCTGAGCCGCATGCACTTACCATCATTGCCCCCATCTTTTTGTTCCCTTACTGACCTTCAAACACTTTGTTTGGATCAATGTGCTTTGGGAGACTTGACCAATATCGGAGCTTTAACGAATTTGCAAATTCTTAGCTTTTATGGATCTTCTATGATAACATGGCCTAGTGAACTAGGGGAATTAACTCATCTTAGAATGTTGGATTTGACTTATTCTGGAATTGAAATCTTCCCTTCCAACATTATATCAAAATTGACCAAATTGGAGGAGTTGTATTTATGCGATACCTCCCTTAGGTGGGACCAAGAAGATTCAATTGAGGAAAACAAAAACGCTTCCCTTTCTGAACTTAGAGACTTTGACAAACTTGATTGCTCTAGAAATTCAAATAAAAGGAGCTTGGGTTTTGCCAAGGGACATAGTATTTGA 2097 0.3848 MEIIATTIAEKVAEPIVNYTVAPIARQVGYLIFYKDNVDNLKNQVEELKRVKDTISHEMETERRNGRQIYDAAQNWLNRVDEIVEAAEQLCGDRRHRNVSCCKGPFPDLKSRHQLSRKSKKMVGDVDRVMQGKDNIGPLAFLPGLEGAGSTYATGSEMLQSRKKMKEDIVLALRDPNLSRIGVYGLGGVGKTTLVKEIAKQVKDDELFDEVVMANISQAADLERSQCEIADLLGLRFEETTIVGKAFRLRQRIENERSILVILDDLWDVLELDNLGIPLNDQKGSKLLLTSRYLDILQKMKTQKDFLMEVLNEQESWRLFEDIAGDGVRDVSLRNVAIQVAQKCGGLIVLIVTVAGALKNDDNIESWKYALNQLNIVDKEGMNEKIYSALEFSYNHLKGDDVKALFLLCGLLGTQVNVADLLKYAMGLGTFKQTYTLKDARVKVHKLIASLKAACLLLENNSNKEVKMHDIVHEVAVSIASRDQHVCKIRRADELWPSNEFLQRCNQIILKGCHIPKLPDRLECPNVKLFHLSNKNDSLSVPDYFFDGMKKLRVLDLSRMHLPSLPPSFCSLTDLQTLCLDQCALGDLTNIGALTNLQILSFYGSSMITWPSELGELTHLRMLDLTYSGIEIFPSNIISKLTKLEELYLCDTSLRWDQEDSIEENKNASLSELRDFDKLDCSRNSNKRSLGFAKGHSI 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5778g00008 698 Gene3D - 310 398 IPR042197 -
Pral5778g00008 698 Pfam Leucine rich repeat 525 585 IPR001611 GO:0005515
Pral5778g00008 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 409 IPR027417 -
Pral5778g00008 698 Gene3D Ribonuclease Inhibitor 473 693 IPR032675 -
Pral5778g00008 698 SMART AAA_5 177 312 IPR003593 GO:0016887
Pral5778g00008 698 SUPERFAMILY L domain-like 467 685 - -
Pral5778g00008 698 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 25 680 - -
Pral5778g00008 698 Coils Coil 31 65 - -
Pral5778g00008 698 Gene3D - 152 308 IPR027417 -
Pral5778g00008 698 PRINTS Disease resistance protein signature 344 358 - -
Pral5778g00008 698 PRINTS Disease resistance protein signature 253 267 - -
Pral5778g00008 698 PRINTS Disease resistance protein signature 547 563 - -
Pral5778g00008 698 PRINTS Disease resistance protein signature 180 195 - -
Pral5778g00008 698 Pfam NB-ARC domain 163 395 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5778g00008 Pral-Chr5778 162402 164498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5778g00008 181 496 WRKY Transcription Factor Family AT5G45050 23.839 1.43e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5778g00008 - - pcin:129288116 631.713