Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5778g00005 ATGAGTTGCTTCGGATGTTTTTCTTCACACACAGAAAAGAAATCGTCAAAGAAATCCCACCATGGAAAGAATATAGAGTCGCCTCTATTGGCAACTTCTGCCCCATTAGAAGCCTCTTCGCAGCCACGCCATGCAACTCATAACCCTAATCCAAAGCCCACTTCACAGTCGACAGAGCCTGAAAAAAATAAGGACGCCAACACAGACATTGGCGGCAATAACATTGCTTCACAGAACTTCACCTTCCGGGATCTGGCAATGGCAACAAAGAACTTCCGGCAAGAAACCCTAATTGGTGAAGGTGGATTCGGAAGGGTTTATAAAGGCAGAATTGAAACAATCCACCAGGATGTAGCAGTGAAACAACTTGACAGGAATGGGTTTCAAGGGAATAGAGAGTTCCTTGTTGAAGTATTGATGTTGAGCCTCTTACATCATGAAAATCTAGTGAATCTAGTTGGCTATTGTGCTGATGGAGATCAGAGACTTTTGGTATACGAATACATGCCATGTGGATCTGTAGAGGATCATCTTCTTGATGTATCTTCTGATCAAAAGCCACTGGATTGGAATATGAGGATGAAAATAGCATTGGGAGCAGCAAAAGGTTTAGAATATTTGCATGATAAGGCAAATCCACCTGTGATCTATAGGGACTTGAAAGCAGCTAACATATTGCTAGACCAGGATTTCAATGCAAAACTCTCAGATTTTGGACTAGCCAAGCTTGGACCTATGGGAGACAAGTCTCATGTTTCTTCCAGAGTAATGGGAACTTATGGATATTGTGCTCCTGAATATCAACGAACGGGTCAACTTACTGTAAAATCAGACATTTATAGTTTTGGAGTCGTGTTGCTCGAATTGATCACTGGAAAAAGAGTCATTGACACTACAAGATCCACACGGGAGCAGAACCTTGTTACTTGGGCACAACCAATATTCAAGGACCCTCATAGACATCCAGAGCTAGCAGATCCTCTTCTAAAAGGAAACTTCCCTTTAAAATCACTGAACCAAGCGGTGGCAATGGCAGCCATGTGCCTGAATGAGGAAGCTGTCGCGCGACCATTAATGAGAGACGTAGTGAGTGCCCTTAGCTTCCTTGGGACAGACATTAATGATTCTAACGCAGGGGGAGGTCATGATGATGATGATGATGAAACTTCCTTTGATGAAAGGCAACATAATGCTACTAAACAAGCCAACACTAGTACTGTTCATTGGGATTTAACTTCTGCAAATTGA 1248 0.4263 MSCFGCFSSHTEKKSSKKSHHGKNIESPLLATSAPLEASSQPRHATHNPNPKPTSQSTEPEKNKDANTDIGGNNIASQNFTFRDLAMATKNFRQETLIGEGGFGRVYKGRIETIHQDVAVKQLDRNGFQGNREFLVEVLMLSLLHHENLVNLVGYCADGDQRLLVYEYMPCGSVEDHLLDVSSDQKPLDWNMRMKIALGAAKGLEYLHDKANPPVIYRDLKAANILLDQDFNAKLSDFGLAKLGPMGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDIYSFGVVLLELITGKRVIDTTRSTREQNLVTWAQPIFKDPHRHPELADPLLKGNFPLKSLNQAVAMAAMCLNEEAVARPLMRDVVSALSFLGTDINDSNAGGGHDDDDDETSFDERQHNATKQANTSTVHWDLTSAN 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5778g00005 415 MobiDBLite consensus disorder prediction 378 395 - -
Pral5778g00005 415 FunFam Serine/threonine-protein kinase PBS1 169 383 - -
Pral5778g00005 415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Pral5778g00005 415 SUPERFAMILY Protein kinase-like (PK-like) 79 373 IPR011009 -
Pral5778g00005 415 Pfam Protein kinase domain 93 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5778g00005 415 MobiDBLite consensus disorder prediction 396 415 - -
Pral5778g00005 415 MobiDBLite consensus disorder prediction 374 415 - -
Pral5778g00005 415 Gene3D Phosphorylase Kinase; domain 1 54 168 - -
Pral5778g00005 415 SMART serkin_6 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5778g00005 415 FunFam probable serine/threonine-protein kinase RLCKVII 63 168 - -
Pral5778g00005 415 Gene3D Transferase(Phosphotransferase) domain 1 169 387 - -
Pral5778g00005 415 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524
Pral5778g00005 415 ProSiteProfiles Protein kinase domain profile. 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5778g00005 415 MobiDBLite consensus disorder prediction 1 75 - -
Pral5778g00005 415 PANTHER OS07G0668900 PROTEIN 21 376 - -
Pral5778g00005 415 MobiDBLite consensus disorder prediction 33 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5778g00005 Pral-Chr5778 51554 53943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5778g00005 1 413 Glycoside Hydrolase AT3G07070 65.228 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral5778g00005 Pkinase 4.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5778g00005 - - fve:101309998 549.28