Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5778g00004 ATGATTGATGATATGGCTATTTCATCAATCCTACATGTTCTTCTGTTGTCTCTGTGTTTCCGGTATTCTTCATCTTCATCATCAACTCTTAGCAGCGGCTTCTCCCTTTCCGTGGAGAAACCAGAAGATGTTCTTATCTCACCGAATGGAACCTTCACGGCTGGATTCCATGTCATTGGTGAAAACGCTTATGTCTTGGCGATCTGGTTCACTCGACTACCTCAATCTTCCCCAAACTCGAATGTAGTTTGGATTGCCAGTCGTGACCAACCTGTCAACGGAAAACGGTCATCTCTTTCCCTCCTCAGAGCAGGAAACCTCATCCTCTCCGATGCTGGACAGAAGAACGTATGGTCAAGTAACACCAACTCGTCGTGGCCGACGCGATTGGCTCTCAACGACAATGGAAATCTAGTACTCTACGAGCTTCATTCGGAAGAGACAAATATTCTATGGCAGAGCTTTGATTTCCCAACAGACACTTTGCTTCCTGGCCAACAACTTAAGAATGACACACAACTTGTCGCAGCGAGAAGTGACACCAACGTTTCCTCTGGCTTCTACAAGCTCTTCTTCGACGACAGCAATGTTCTTCGCCTTCTCTATCACAGGCTTGACGTTTCCAGTGTGTATTGGCCAGCGCCATGGATGTTGAGTTTTGAAGCTGGAAGGAGCACAGAAAATAGTAGTAGACTCGCTGTGTTAGATTCTCTTGGGAGTTTCATTTCAACAGATAACTTCAAATTTACAACTTCTGATTATGAGATATCGACCCAAAGAAGATTGAAAATCGATCCTGATGGCAGCCTTCGAGTGTACAGCTTACAGAAGAATAATCAATGGTACGTCTCGTGGCAAGCTATAGCTGATGCCTGCCATGTTCATGGAATATGTGGAGTCAATAGTATGTGCAAGTACGATCCTAGCCATGGAAGGAAATGCTCGTGTCTTCCAGGGTACAGAATCAAGAACCATAGCGATTGGTCTTATGGGTGTGAACCCAAATTTGAATTCTCATGTGGTCAAAATTTCTTGAAATTGCCCGGTGTTGAGTTCTATGGAAATGACTATGTCTATAAGCTAAACATCAGTTTCAAGAACTGCAAGAATTTGTGCTTACATGATTGTGAGTGCAGGTTGTTTCAGTACACATTCGGAGAGGATATGGGCCAATTTAGGTGCTACATCAAAAGAATTCTGATCAACGGTCATAATTCACCAAGCTTTCGAGGAACAACCTACTTAAGACTACCTCAAACCAATGAAGGTTCATTCCTTGAAGAAGAAGAATCTGCCCGTGATGATGGTGATGTTTGCTTCGTAAAGTTTGAAGGAGCCTCACAAAATGTCAGCAGTTTTGTCAAGTTTCTTCTTTGGTTTTCCGTTGCTGTTGGGGTGCTTGAAGTCCTCTGTATTAGTCTAATTTGGTGTTCTTTGATTAGACCCAAAAAGAGCTCTGATTCAAATCCACAAGTCTACAATTTTCTTTCTCCTTTCCGGTTCAGAAAATTTACTTACTCTGAGCTAAAACAAGCAACCAAAGGGTTCAAAGAAGAAATCGGAAGAGGAGCAGGTGGAATAGTGTACAAAGGAGTATTATCAGATCAACGAGTTGCTGCAATAAAGAAGCTGAATGGTGACAACACAGGAGGAGGCAAACAAGAAGAAGGAGAATTTATGGCTGAAGTGAGCATAATCGGTAGACTTAACCACATGAACTTGATCGAAATGTGGGGCTACTGTGCTGAAGGAAAGCAAAGGCTGTTGGTGTACGAGTACATGGAAAAGGGTTCTTTAGCAGAAAATCTCAGATCAAACACTTTGGATTGGACCAAAAGATACAACATTGCTCTTGGAACAGCAAGAGTCCTAGCATACTTGCACGAAGAATGTTTGGAGTGGATTCTGCATTGCGACATAAAACCGCATAATATTCTTCTGGACTCAAATTACGAACCCAAGGTAGCAGATTTTGGTTTATCTAAGCTTAAAAATCGGAATGACCAAAACACTCAAAGCTTCTCAATGATCAGAGGAACGAGGGGCTATATGGCACCAGAGTGGGTTTTCAATCTGCCAATAACATCAAAGGTGGATGTGTATAGCTACGGGATCGTTATATTGGAAATGATAACAGGAAGGAGTCCGATGATGATGGGAAATCAGAGTGATGAAGGCGAAGAGGCTCAACATGTGAGGCTTGTGACGTGGGTGAGAGAGAAGAAGAAGAACAACAACAAAACGACGTCGGAGGAAGTGTCTTCGTGGGTGAAGCAAATAATTGATCCCGCCTTGATATCAGAGTTCGAGGTTGAGAAGCAGAAGATAGAAACTTTGGCAAATGTGGCTTTGAGGTGCGTGAAGGAAGACAAAGATGAAAGGCCCACCATGAGCCAAGTTGTAGAAATGCTTCAGAGCCAAGAAGATGACTATGCTGCTGAATTAATCATGGCGGCTTAG 2460 0.4297 MIDDMAISSILHVLLLSLCFRYSSSSSSTLSSGFSLSVEKPEDVLISPNGTFTAGFHVIGENAYVLAIWFTRLPQSSPNSNVVWIASRDQPVNGKRSSLSLLRAGNLILSDAGQKNVWSSNTNSSWPTRLALNDNGNLVLYELHSEETNILWQSFDFPTDTLLPGQQLKNDTQLVAARSDTNVSSGFYKLFFDDSNVLRLLYHRLDVSSVYWPAPWMLSFEAGRSTENSSRLAVLDSLGSFISTDNFKFTTSDYEISTQRRLKIDPDGSLRVYSLQKNNQWYVSWQAIADACHVHGICGVNSMCKYDPSHGRKCSCLPGYRIKNHSDWSYGCEPKFEFSCGQNFLKLPGVEFYGNDYVYKLNISFKNCKNLCLHDCECRLFQYTFGEDMGQFRCYIKRILINGHNSPSFRGTTYLRLPQTNEGSFLEEEESARDDGDVCFVKFEGASQNVSSFVKFLLWFSVAVGVLEVLCISLIWCSLIRPKKSSDSNPQVYNFLSPFRFRKFTYSELKQATKGFKEEIGRGAGGIVYKGVLSDQRVAAIKKLNGDNTGGGKQEEGEFMAEVSIIGRLNHMNLIEMWGYCAEGKQRLLVYEYMEKGSLAENLRSNTLDWTKRYNIALGTARVLAYLHEECLEWILHCDIKPHNILLDSNYEPKVADFGLSKLKNRNDQNTQSFSMIRGTRGYMAPEWVFNLPITSKVDVYSYGIVILEMITGRSPMMMGNQSDEGEEAQHVRLVTWVREKKKNNNKTTSEEVSSWVKQIIDPALISEFEVEKQKIETLANVALRCVKEDKDERPTMSQVVEMLQSQEDDYAAELIMAA 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5778g00004 819 Pfam D-mannose binding lectin 82 173 IPR001480 -
Pral5778g00004 819 SMART serkin_6 514 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5778g00004 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Pral5778g00004 819 Gene3D - 21 156 IPR036426 -
Pral5778g00004 819 PANTHER OS07G0415500 PROTEIN 7 809 - -
Pral5778g00004 819 FunFam Putative receptor-like protein kinase 594 811 - -
Pral5778g00004 819 ProSiteProfiles PAN/Apple domain profile. 340 413 IPR003609 -
Pral5778g00004 819 PIRSF SRK 1 815 IPR024171 GO:0004674
Pral5778g00004 819 CDD PAN_AP_plant 339 418 - -
Pral5778g00004 819 Gene3D Phosphorylase Kinase; domain 1 479 593 - -
Pral5778g00004 819 Pfam S-locus glycoprotein domain 243 323 IPR000858 GO:0048544
Pral5778g00004 819 ProSiteProfiles Protein kinase domain profile. 514 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5778g00004 819 ProSiteProfiles Bulb-type lectin domain profile. 21 153 IPR001480 -
Pral5778g00004 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 175 IPR036426 -
Pral5778g00004 819 SUPERFAMILY Protein kinase-like (PK-like) 489 806 IPR011009 -
Pral5778g00004 819 Pfam Protein kinase domain 517 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5778g00004 819 FunFam S-receptor-like serine/threonine-protein kinase 482 593 - -
Pral5778g00004 819 CDD STKc_IRAK 520 805 - -
Pral5778g00004 819 ProSitePatterns Protein kinases ATP-binding region signature. 520 543 IPR017441 GO:0005524
Pral5778g00004 819 SMART blect_4 21 158 IPR001480 -
Pral5778g00004 819 CDD B_lectin 45 158 IPR001480 -
Pral5778g00004 819 Gene3D Transferase(Phosphotransferase) domain 1 594 816 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5778g00004 Pral-Chr5778 35710 38633 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5778g00004 504 809 Trihelix Transcription Factor Family AT5G38560 40.836 1.04e-61 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral5778g00004 Pkinase 6.2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5778g00004 - - gmx:100783758 939.102