Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5778g00003 ATGCGTATTCATATGGCTGTTTCATCAATCCTACACGTTCTTCTCCTCTTGTCTCTGTCTTTTCAATGTTGTTCATCTTCATCACCATCACTTAACAGTGGTTTCTCCCTCTCAGTTGAGAAACCAGAAGATGTTATTCTCTCACCGAACGGCGTCTTCTCTGCCGGCTTCTACGCCGTTGGTGAAAACGCCTATGTATTCTCCGTTTGGTTCACTCGAAAACCCACCGTCGTTTGGACGGCTAACCGTGACCAACCTGTCAACGGAAAACGGTCATCACTTCGCCTCCATAAAACCGGAAACCTTGTCCTCTCTGATGCCGGACAGTTCAACGTGTGGTCCACTGACACTACCTCATCTTTGCCTTGGTTGACGCAACTGAATCTTACCGATAAAGGGAATCTAGTACTTTACGAGCTCCATCCTCAACAAAGCGAAATTCTATGGCAGAGCTTCGATTTCCCGACCGACACTCTACTTCCTGGACAACAACTCACAAGATACACAAAGCTTGTCTCTGATAGAAGCCTCACCAACCATTCCTCTGGCTTCTACCAGCTTTCATTCAATGATGACAACATCCTCAGCCTTTTGTACGATGGCCTTGATGTCTCCAGCAAATACTGGCCAGTCCAATGGCTAGTAAGTTGGGATGCAGGAAGGACCACATACAATAGTAGCAGAATCGCAGTGTTAGATTCCATTGGAACTTTCAATTCAACAGATAATTATGGATTTACGACTTCTGATTATGGGGTTGTGATGCAAAGAATATTGAAACTAGATTCTGACGGAAACATTCGAGTGTACAGTCGACGGAAGAATGATCCCTGGTATGTGTCGTGGCAAGCCATATCTAATCCCTGTATTGTTCATGGACTTTGTGGTGCTAACAGCACGTGTGTGTATGATCCTATAGAAGGAAGGAAGTGTTCGTGTCTTCCTGGATATAGAGTGAAGAACCATAGCGATTGGTCTTACGGGTGTGAACCCACATTTAAACTCTCATGCGATAAGAATGAGACTGCTTTCTTCAAATTGCCAGGTGTTGAGCTATATGGGTATGACTTTATTTACAAGAAAAACATCAGTTATAGTGATTGTGAGAATGAATGCTTACAAGATTGTGAGTGCAGGGCATTTCAGTACTCACTTAACAATGACGGCTTATTTCAGTGCTATACGAAAAGAGTTCTTCTCAATGGTCGTCGATCACCAGACTTTAGAGGAACAACCTACCTGAGACTTCCTGAAGCCAAAAGAAACAATGTTTCGTTCTTTGCAGATGAAGAATTTGCTCAAGATGATGGTCATGTTTGTTCAGTGAAGCTGGATAGATCCTATGCCGAGAGACATGTCAGCAGTTTTTTGAAGTTCTTTCTTTGGTTTTCTGTTGCAATTGGGGTGTTTGAAGTCCTCTTCATTTCTATAACTTGGTTTTCTTTGATAAGAACCAAGCAAAAATCTGATGGAAATCAACAAGGGTACAATTTTCTTTCACCTTTTGGGTTCAGAAGATACACTTACTCTGAGCTAAAACAAGCAACAAAAGGGTTCACGGAAGAAATTGGAAGAGGAGCTGGTGGAATTGTGTACAAAGGAGTATTGCCAGATCAGCGAATTGCTGCAATAAAGAAGCTTCATAATGACAACATTGGAGCCAAACGAGATGAAGCAGAATTCCTAGCTGAAGTGAGCATTATTGGTAAGCTAAACCACATGAACTTGATTGAAATGTGGGGGTATTGTGCTGAGGGAAAGTACAGGCTGTTGGTTTACGAATACTTGGAGAAAGGTTCTTTAGCAGAAAATCTCAAATCAAACACCTTGGATTGGACCAGAAGATACAACATTGCTCTCGGAACAGCAAGGGTTCTAGCATACTTACACGAAGAATGCTTGGAGTGGATTCTACATTGTGATATAAAGCCTCAGAATATTCTTTTGGATTCAAATTACCAACCCAAGGTAGCAGATTTTGGCTTATCTAAGCTTCTAAATAGAAGTGACCAAAACACTCAAAACTTCTCAATGGTAAGAGGAACGAGAGGATACATGGCACCTGAATGGGTTTTTAATTTGCCAATAACATCAAAGGTGGATGTGTATAGCTTTGGGATTGTTGTGCTGGAGATGATAACAGGAAGGAGTCCGACGATGATGGGAGGTCAGAGTGATGAAGGAGAAGAAGCACATAATGAGAGGCTTGTGACGTGGGTGAGAGAGAAGAGGAAGACAACGACGTCGGAGGAGGAAGGGTCGCCGTCATCGTCTTGTTGGGTGGAGCAAATAATTGACGCAGCCATTGGATCGGAGTTTGAGGTTGAGAAAAAGAAGATGGAAACTTTGGCAAGTGTGGCTTTGAAGTGCGTGGAAGAAGACAAAGATGTGAGGCCCAGCATGAGCCAAGTTGTTGAGATGCTTCAAAGCCATGAAGATGCTTAA 2445 0.4278 MRIHMAVSSILHVLLLLSLSFQCCSSSSPSLNSGFSLSVEKPEDVILSPNGVFSAGFYAVGENAYVFSVWFTRKPTVVWTANRDQPVNGKRSSLRLHKTGNLVLSDAGQFNVWSTDTTSSLPWLTQLNLTDKGNLVLYELHPQQSEILWQSFDFPTDTLLPGQQLTRYTKLVSDRSLTNHSSGFYQLSFNDDNILSLLYDGLDVSSKYWPVQWLVSWDAGRTTYNSSRIAVLDSIGTFNSTDNYGFTTSDYGVVMQRILKLDSDGNIRVYSRRKNDPWYVSWQAISNPCIVHGLCGANSTCVYDPIEGRKCSCLPGYRVKNHSDWSYGCEPTFKLSCDKNETAFFKLPGVELYGYDFIYKKNISYSDCENECLQDCECRAFQYSLNNDGLFQCYTKRVLLNGRRSPDFRGTTYLRLPEAKRNNVSFFADEEFAQDDGHVCSVKLDRSYAERHVSSFLKFFLWFSVAIGVFEVLFISITWFSLIRTKQKSDGNQQGYNFLSPFGFRRYTYSELKQATKGFTEEIGRGAGGIVYKGVLPDQRIAAIKKLHNDNIGAKRDEAEFLAEVSIIGKLNHMNLIEMWGYCAEGKYRLLVYEYLEKGSLAENLKSNTLDWTRRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDSNYQPKVADFGLSKLLNRSDQNTQNFSMVRGTRGYMAPEWVFNLPITSKVDVYSFGIVVLEMITGRSPTMMGGQSDEGEEAHNERLVTWVREKRKTTTSEEEGSPSSSCWVEQIIDAAIGSEFEVEKKKMETLASVALKCVEEDKDVRPSMSQVVEMLQSHEDA 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5778g00003 814 ProSiteProfiles Protein kinase domain profile. 517 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5778g00003 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 173 IPR036426 -
Pral5778g00003 814 SMART blect_4 37 155 IPR001480 -
Pral5778g00003 814 ProSiteProfiles EGF-like domain profile. 285 323 IPR000742 -
Pral5778g00003 814 CDD STKc_IRAK 523 809 - -
Pral5778g00003 814 ProSiteProfiles Bulb-type lectin domain profile. 31 150 IPR001480 -
Pral5778g00003 814 SUPERFAMILY Protein kinase-like (PK-like) 495 808 IPR011009 -
Pral5778g00003 814 ProSitePatterns Protein kinases ATP-binding region signature. 523 546 IPR017441 GO:0005524
Pral5778g00003 814 Gene3D - 26 154 IPR036426 -
Pral5778g00003 814 CDD PAN_AP_plant 333 417 - -
Pral5778g00003 814 Gene3D Transferase(Phosphotransferase) domain 1 596 814 - -
Pral5778g00003 814 SMART ntp_6 339 416 IPR003609 -
Pral5778g00003 814 PANTHER OS07G0415500 PROTEIN 8 811 - -
Pral5778g00003 814 ProSiteProfiles PAN/Apple domain profile. 337 417 IPR003609 -
Pral5778g00003 814 FunFam S-receptor-like serine/threonine-protein kinase 485 595 - -
Pral5778g00003 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Pral5778g00003 814 Pfam S-locus glycoprotein domain 250 320 IPR000858 GO:0048544
Pral5778g00003 814 Pfam PAN-like domain 337 394 IPR003609 -
Pral5778g00003 814 PIRSF SRK 1 814 IPR024171 GO:0004674
Pral5778g00003 814 SMART serkin_6 517 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5778g00003 814 CDD B_lectin 46 155 IPR001480 -
Pral5778g00003 814 Gene3D - 155 280 IPR036426 -
Pral5778g00003 814 SUPERFAMILY Hairpin loop containing domain-like 338 394 - -
Pral5778g00003 814 FunFam Putative receptor-like protein kinase 596 814 - -
Pral5778g00003 814 Gene3D Phosphorylase Kinase; domain 1 482 595 - -
Pral5778g00003 814 Pfam Protein kinase domain 520 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5778g00003 814 CDD EGF 288 322 - -
Pral5778g00003 814 Pfam D-mannose binding lectin 76 177 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5778g00003 Pral-Chr5778 32227 34671 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5778g00003 507 814 Trihelix Transcription Factor Family AT5G38560 39.617 2.69e-62 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral5778g00003 Pkinase 2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5778g00003 - - gmx:100784287 994.186