Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5778g00002 ATGGCGGTTTCATTAATGCTTCACGTTCCTCTCCTCTTATATCTTTTTTTCCATTCTTCATCGTCATCACATAATAGTCGCTTCTCTCTTTCAGTGGAGAAACCGGAATATGTTATTCTGTCACAAAACGGCGTCTTCTCTGCCGGCTTCTACCTCGTTGGTGAAAACGCGTATGTATTCTCCATTTGGTTCACCCAAACCCATGCCGTCGTTTGGACAGCAAACCGTGACCGACCCATCAACGGTAAGCGCTCCTCACTCTCCATCGACCGCACCGGAAACCTTGTCCTCTCTGATGCTGGCCAGTACAAGGTGTGGTCGACCGACACCACCTCGTCTTTGTCGACCCAATTAATCCTCAACAACAGTGGAAATCTAGTACTTTGCGAGCACCAATCACGAGGAAGCAAGATTCTATGGCAGAGCTTTGATTCTCCAACAGACACTCTACTTCCTGGACAACAACTCACAAGATATACAAAGCTTGTCTCTGCTAGAAGCGAAACCAACAATTCCTCTGGATTTTACAAGCTTATCTTCGATGATGAAAATGTCCTTACCCTTCTATATGATGGCCGCGACGTCTCCAGCAAATATTGGCCCCCGCCATGGCTTGTGAGCTGGGAAGCTGAAAGAAGCACCTATGACAGTAGCAGAATCGCAGTGTTAGATCCACTTGGACGTTTCAGTTCAACAGACATGTATAACTTCACAACTTCTGATTATGGTGTTTTGATACAAAGAAGATTGAAATTAGATCCTGATGGAAACATTCGAGTGTACAGCCTGCATAATAATCAATGGGAAGTGACATGGCAAGCCATATCTGATGCTTGTATTGTGCATGGACTTTGTGGTGCTGACAGCACATGCAAGTACGATCCCAGGGAAGGAAGGAAGTGCTCATGTCTTCCTGGATATAGAGTGAAGAATCATAGTGATTGGTCTTATGGTTGTGAACCCATGTTTCAACTGCCACGCGGTAGAAATGAGTCGACCTTCATCAAATTACCCTATGTTGAGCTGTATGGGTATGAGTTTTTTCATAAAAAGAACATCACTTACGGTGAATGTGAGCGTGAATGCTTAAAAGACTATGAGTGCAAGTCATTTCAGTACTCAATTGAGAGTAAGGACGGGCTGTTTGGCTGCTATACAAAAGGAGTTATGCTCAATGGTCATCACTCACCAAGTTTCAGAGGAGCAACCTACTTAAGAGTCCCAAAAAACCTAAGCAACGATGGTTCGTTCCATACTGTAGAAGAAGAATCGGCTCAGGAAAATGGTCATGTTTGCTTAGTGAAACTTGAAAGAGTTTATAGCAAGAGACACGTCAGCAGTTTTGTGAAGTTCTTCCTTTGGTTTTCGGTAGCAATTGGGGTAGCTGAAGTGCTCTTAATTTTTATAATTTGGTGTTCTTTGATTAGAACAAAACACAGGTCTAGCGGAAATCAACAAGGCTACAATTTTCTCTCCCCTTTTGGGTTCAAAAGATTTACTTACTCTGAGCTGAAACAAGCAACAAAAGGGTTCACAGAAGAAATTGGAAGAGGCTCAGGCGGAATAGTGTACAAAGGAGCACTGGTTGATCAAAGAATTGCAGCAATTAAGAAGCTGAACAATAACATCGTTGGAGCCAAACAAGAAGAAAGAGAATTCCTAGCTGAAGTGAGAATAATCGGTAGGCTTAACCACATGAACTTGATTGAAATGTGGGGGTATTGTGCCGAGGGAAAGCACAGGCTGTTGGTGTATGAATACTTGGAGAAAGGTTCTTTAGCAGAAAATCTCAAATCAAACACTCTGGATTGGACCAAAAGATACAACATTGCTCTTGGAACAGCAAGGTGTCTCGCTTACTTACATGAAGAATGCTTGGAGTGGATTCTTCATTGTGATATAAAGCCCCATAATATCCTTTTGGATTCAAATTACCAACCCAAGGTAGCAGATTTCGGCTTATCTAAGCTTCAAAATCGGCATGACCAAAACTCTCAAAGCTTCTCTATGATAAGAGGAACAAGGGGATATATGGCGCCTGAATGGCTTTTCAACCAAAAAATAACCTCAAAAGTGGATGTGTATAGCTATGGGATTGTTATGTTGGAGATGATAACAGGAAGGAGTCCAACGATGATGGGAATTCAGAACGACGAAGGCGAAGAGACACAAAGCAGGAGCCTTGTGACATGGGTGAGAGATAAAAGAAAGAAAACAACATCAGAGGAGGGGCCGTCGTCGTGGAGTTGGGTGGAGCAGATAATTGACACAACCATTATATCAGAGTATGGGGTTGAGAAGCGAAAGATGGAGACTTTGGCTAAAGTGACTATTGAGTGTGTGGAAGAAGACAGGGATACGAGGCCCAGCATGAGCCAAGTTGTTGAGATGCTTCAAAGCCATGAAGACGATGCTTCTTAA 2421 0.4304 MAVSLMLHVPLLLYLFFHSSSSSHNSRFSLSVEKPEYVILSQNGVFSAGFYLVGENAYVFSIWFTQTHAVVWTANRDRPINGKRSSLSIDRTGNLVLSDAGQYKVWSTDTTSSLSTQLILNNSGNLVLCEHQSRGSKILWQSFDSPTDTLLPGQQLTRYTKLVSARSETNNSSGFYKLIFDDENVLTLLYDGRDVSSKYWPPPWLVSWEAERSTYDSSRIAVLDPLGRFSSTDMYNFTTSDYGVLIQRRLKLDPDGNIRVYSLHNNQWEVTWQAISDACIVHGLCGADSTCKYDPREGRKCSCLPGYRVKNHSDWSYGCEPMFQLPRGRNESTFIKLPYVELYGYEFFHKKNITYGECERECLKDYECKSFQYSIESKDGLFGCYTKGVMLNGHHSPSFRGATYLRVPKNLSNDGSFHTVEEESAQENGHVCLVKLERVYSKRHVSSFVKFFLWFSVAIGVAEVLLIFIIWCSLIRTKHRSSGNQQGYNFLSPFGFKRFTYSELKQATKGFTEEIGRGSGGIVYKGALVDQRIAAIKKLNNNIVGAKQEEREFLAEVRIIGRLNHMNLIEMWGYCAEGKHRLLVYEYLEKGSLAENLKSNTLDWTKRYNIALGTARCLAYLHEECLEWILHCDIKPHNILLDSNYQPKVADFGLSKLQNRHDQNSQSFSMIRGTRGYMAPEWLFNQKITSKVDVYSYGIVMLEMITGRSPTMMGIQNDEGEETQSRSLVTWVRDKRKKTTSEEGPSSWSWVEQIIDTTIISEYGVEKRKMETLAKVTIECVEEDRDTRPSMSQVVEMLQSHEDDAS 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5778g00002 806 SMART serkin_6 509 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5778g00002 806 SMART blect_4 29 146 IPR001480 -
Pral5778g00002 806 ProSiteProfiles EGF-like domain profile. 275 313 IPR000742 -
Pral5778g00002 806 PANTHER OS07G0415500 PROTEIN 7 802 - -
Pral5778g00002 806 Pfam S-locus glycoprotein domain 244 310 IPR000858 GO:0048544
Pral5778g00002 806 SUPERFAMILY Hairpin loop containing domain-like 330 385 - -
Pral5778g00002 806 Coils Coil 536 556 - -
Pral5778g00002 806 Gene3D - 29 144 IPR036426 -
Pral5778g00002 806 Pfam Protein kinase domain 512 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5778g00002 806 CDD PAN_AP_plant 327 408 - -
Pral5778g00002 806 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Pral5778g00002 806 FunFam Putative receptor-like protein kinase 588 806 - -
Pral5778g00002 806 ProSitePatterns Protein kinases ATP-binding region signature. 515 538 IPR017441 GO:0005524
Pral5778g00002 806 SUPERFAMILY Protein kinase-like (PK-like) 487 799 IPR011009 -
Pral5778g00002 806 ProSiteProfiles Bulb-type lectin domain profile. 24 141 IPR001480 -
Pral5778g00002 806 CDD B_lectin 39 146 IPR001480 -
Pral5778g00002 806 FunFam S-receptor-like serine/threonine-protein kinase 477 587 - -
Pral5778g00002 806 Gene3D Transferase(Phosphotransferase) domain 1 588 806 - -
Pral5778g00002 806 Gene3D Phosphorylase Kinase; domain 1 473 587 - -
Pral5778g00002 806 CDD STKc_IRAK 515 799 - -
Pral5778g00002 806 PIRSF SRK 1 806 IPR024171 GO:0004674
Pral5778g00002 806 ProSiteProfiles Protein kinase domain profile. 509 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5778g00002 806 Pfam D-mannose binding lectin 70 159 IPR001480 -
Pral5778g00002 806 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 201 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5778g00002 Pral-Chr5778 10758 13178 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5778g00002 499 803 Trihelix Transcription Factor Family AT5G38560 39.355 1.68e-62 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral5778g00002 Pkinase 1.8e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5778g00002 - - gmx:100784287 952.97