Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5778g00001 ATGGAAATAGAATATGGCGGTTTCATTAATGCTTCACTTTCCTCTCCTCTTATCTCTTTTTTCCAATCTTCATCGTCATCACATAATAGTCGCTTCTCTCTTTCAGTGGAGAAACCAGAAGATGTTATTCTGTCACAAAACGGCGTCTTCTCTGCCGGCTTCTACCTCGTTGGTGAAAACGCCTATGTATTCTCCATTTGGTTCGCCCAAACCCTCGCCGTTGTTTGGACAGCAAACCGTGACCGATCCATCAACGGTAAGCGCTCCTCACTCTCCATCCACCGCACCGGAAACCTTGTCCTCTCTGATGCTGGCCAATACGAGGTGTGGTCGACCGCCACCACCTCGTCTCTGCCGACCCAATTGATCCTCAACAACAATGGAAATCTAGTACTTTATGAGCACCAATTACGAGGAAGCAAGATTCTATGGCAGAGCTTTGATTTCCCAACCGACACTCTACTTCCTGGGCAGCAACTCACAAGATATACAAAGCTCGTCTCTGCTAGAAGCGAAACCAACTATTCCTCTGGATTCTACAAGCTTGTCTTCGATGACGAAAATGTTCTTACCCTTCTATATGATGGTCCCGATGTCTCCAGCAAATATTGGCCATCACCGTGGCTTAAGAGCTGGGAAGCTGACAGAAACATCTACGATAGTAGTAGAATTGCAGTGTTAGATTCACTTGGAGGTTTCAGTTCAACAGACAAAAGATTGAAATTAGATCCTGATGGAAACATTCGAGTGTACAGCCTACAGAATAATCTATGGGAGGTGACATGGCAAGCCATATCTGATGCTTGCATTGTGCATGGACTTTGTGGTGCTGACAGCACGTGTGTGTATGATCCTAGAGAAGGAAGGAAGTGTTCGTGTCTTCCTGGATATAGAGTGAAGAACCATAGCGATTGGTCTTATGGGTGTGAACCCACATTTAAACTCTCATGCAATAAAAAGGAGACCACTTTCTTCAAATTGCAAGATGTTGAGCTCTATGGGTATGACTTTTTTTACAAGGAAAACATAAGTTATAGTGATTGTGAGAATGAATGCATAGAAGATTGTGAGTGCAGGGCATTTCAGTACTCATTTAACCATGACGGCTTATTTCAATGCTATGCGAAAAGAGTTCTTCTCAATGGTCGTCGATCACCAGACTTTAGAGGAACAACCTACTTGAGACTTCCTAAAACCAAAAGAAACAATGTTTCGTTCTTTGCAGATGAAGAATTTGCTCAAGATAATGGTCATATTTGTTCAGTGAAGCTGGATAGAGCCTATGCCAAGAGACATGTCAGCAGTTTTTTGAAGTTCTTTCTTTGGTTTTCTGTTGCAATTGGGTTGGTTGAAGTCCTCTTCATTTCTATGACTTGGTTTTATTTGATAAGAACCAAGCAAAAATCTGATGGAAATCAACAAGGGTACAATTTTCTTTCACCTTTTGGGTTCAGAAAATATACTTACTCTGAGCTAAAACAAGCAACAAAAGGGTTCACGGAAGAAATTGGAAGAGGAGCTGGTGGAATAGTGTACAAAGGAGTATTGCCAGATCAGCGAACTGCTGCAATAAAGAATCTTCATGATGACAACATTGGAGCCAAACGAGATGAAGCAGAATTCCTAGCTGAAGTGAGCATTATTGGTAAGCTAAACCACATGAACTTGATTGAAATGTGGGGGTATTGTGCTGAGGGAAAGCATAGGCTATTGGTTTACGAATACTTGGAGAAAGGTTCTTTAGCAGACAATCTCAAATCAAACACTTTGGATTGGACCAAAAGATACAACATTGCTCTCGGAACAGCAAGGGTTCTAGCATACTTACACGAAGAATGCTTGGAGTGGATTCTACATTGTGATATAAAGCCTCAGAATATTCTTTTGGGTTCAAATTACCAACCCAAGGTAGCAGATTTTGGCTTATCTAAGCTTCTAAATAGAAGTGACCAACACACTCAAAACTTCTCAGTGGTAAGAGGAACGAGAGGATACATGGCACCTGAATGGGTTTTCAATTTGCCAATAACATCAAAGGTGGATGTGTATAGCTTTGGGATTGTTGTGCTGGAGATGATAACAGGAAGGAGTCCGACGATGATGGGAGGTCAGAGTGATAAAGCAGAAGAAGCACATAATGAAAGGCTAGTGATGTGGGTGAGAGAGAAGAGGAAGAAAATGACGTCGGAGGAGGAAGGGTCGTCGTCATCCTCTTGGGTGGAGCAAATAATTGAGGCAGCCATTGGATCGGAGTTTGACGTTGAGAAGAAGAAGATGGAAACTTTGGCAAATGTGGCTCTGAAGTGCGTGGAGGAGGACAAAGATGCGAGGCCCAGCATGAGCCAAGTTGTTGAGATGCTTCAAAGCCATGAAGATGATGCCTCTTAA 2388 0.4259 MEIEYGGFINASLSSPLISFFQSSSSSHNSRFSLSVEKPEDVILSQNGVFSAGFYLVGENAYVFSIWFAQTLAVVWTANRDRSINGKRSSLSIHRTGNLVLSDAGQYEVWSTATTSSLPTQLILNNNGNLVLYEHQLRGSKILWQSFDFPTDTLLPGQQLTRYTKLVSARSETNYSSGFYKLVFDDENVLTLLYDGPDVSSKYWPSPWLKSWEADRNIYDSSRIAVLDSLGGFSSTDKRLKLDPDGNIRVYSLQNNLWEVTWQAISDACIVHGLCGADSTCVYDPREGRKCSCLPGYRVKNHSDWSYGCEPTFKLSCNKKETTFFKLQDVELYGYDFFYKENISYSDCENECIEDCECRAFQYSFNHDGLFQCYAKRVLLNGRRSPDFRGTTYLRLPKTKRNNVSFFADEEFAQDNGHICSVKLDRAYAKRHVSSFLKFFLWFSVAIGLVEVLFISMTWFYLIRTKQKSDGNQQGYNFLSPFGFRKYTYSELKQATKGFTEEIGRGAGGIVYKGVLPDQRTAAIKNLHDDNIGAKRDEAEFLAEVSIIGKLNHMNLIEMWGYCAEGKHRLLVYEYLEKGSLADNLKSNTLDWTKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLGSNYQPKVADFGLSKLLNRSDQHTQNFSVVRGTRGYMAPEWVFNLPITSKVDVYSFGIVVLEMITGRSPTMMGGQSDKAEEAHNERLVMWVREKRKKMTSEEEGSSSSSWVEQIIEAAIGSEFDVEKKKMETLANVALKCVEEDKDARPSMSQVVEMLQSHEDDAS 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5778g00001 795 CDD EGF 269 302 - -
Pral5778g00001 795 Pfam S-locus glycoprotein domain 236 300 IPR000858 GO:0048544
Pral5778g00001 795 Pfam D-mannose binding lectin 74 163 IPR001480 -
Pral5778g00001 795 PIRSF SRK 7 795 IPR024171 GO:0004674
Pral5778g00001 795 ProSiteProfiles PAN/Apple domain profile. 317 397 IPR003609 -
Pral5778g00001 795 CDD STKc_IRAK 503 788 - -
Pral5778g00001 795 ProSiteProfiles EGF-like domain profile. 265 303 IPR000742 -
Pral5778g00001 795 CDD PAN_AP_plant 313 397 - -
Pral5778g00001 795 Pfam PAN-like domain 317 373 IPR003609 -
Pral5778g00001 795 ProSiteProfiles Protein kinase domain profile. 497 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5778g00001 795 MobiDBLite consensus disorder prediction 773 795 - -
Pral5778g00001 795 Pfam Protein kinase domain 500 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5778g00001 795 SMART serkin_6 497 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5778g00001 795 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Pral5778g00001 795 Gene3D - 24 149 IPR036426 -
Pral5778g00001 795 FunFam Putative receptor-like protein kinase 576 795 - -
Pral5778g00001 795 SUPERFAMILY Hairpin loop containing domain-like 318 368 - -
Pral5778g00001 795 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 207 IPR036426 -
Pral5778g00001 795 Gene3D Phosphorylase Kinase; domain 1 463 575 - -
Pral5778g00001 795 SMART blect_4 34 150 IPR001480 -
Pral5778g00001 795 FunFam S-receptor-like serine/threonine-protein kinase 465 575 - -
Pral5778g00001 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Pral5778g00001 795 Gene3D Transferase(Phosphotransferase) domain 1 576 795 - -
Pral5778g00001 795 ProSiteProfiles Bulb-type lectin domain profile. 28 145 IPR001480 -
Pral5778g00001 795 CDD B_lectin 43 150 IPR001480 -
Pral5778g00001 795 PANTHER OS07G0415500 PROTEIN 13 791 - -
Pral5778g00001 795 SUPERFAMILY Protein kinase-like (PK-like) 475 788 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5778g00001 Pral-Chr5778 4866 8008 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5778g00001 487 792 Trihelix Transcription Factor Family AT5G38560 38.907 1.36e-60 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral5778g00001 Pkinase 3.6e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5778g00001 - - gmx:100784287 949.118