Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5775g00009 ATGTTGTTCACAATGCTTTTAAATCATCTGGTGCAGGATGAAATCTCAAGCCCAATTAGTGCTCGAATTTTCGAGCTTTGTGACCCTGAATTGTTCCCGGAGACCCTGCAGAATTCTGAGGTTACCTCCAGCTCAAACTGTTGCTATGAAGAGAACTCCTCCTATACCCCAAATATATCTCTAGCGTTAGATGTAGACAATAAGTTCAGCAATAGCAATACAATCACCACCCAAACCAGCGCAAACACGACCAGCACCGCCCCGGCTGCGCCTACTGCCAACACTACCACCAACAACAATACAACCAACAGCAGCAATCTGTCCATTATCTTTGACTCACAAGATGAAATTGACAATGACATTTCTGCCTCCATAGACTTCTCTACATCTCCTGCTTTTCCTGTCCCTCCATATCTCCCAGTCACAACTCAACAGGATCAGCAATTTGATTTCTCTTCACTGCAGCCTCAGGTCACACTTGCAGCAAGTTCAGTTGTGGAAGGCCTTGCACAATACCCCACTGACTCTGCTGTTGCACCTCTTATGGGGGCTCCATTAACTACCGTTTTTGAAGAGGATTGCTTATCTTCTGTCCCTTCTTATGTGCCTTTGAACCCTTCATCTCCTTCTTGCTCTTATCTTAACCCTGGCATAGGACCATACATGCCTCTTGGTCCCCTTAATACTGCCTTATCTGCTGATAGTTCTGGGATATTTGGTGGGAGCATTCTTCTGGGTTCTGAACTGCAGGCACAAGAACTGGATTACCAGGGAGAAAATGGTGGAATTTATTGTCCAGATTCAATTCAAAGGGTTTTCAACCCTCCAGACCTCCAGGCACTTAGCGCTGAGAGTCAGCAACTGGTAGCTGGGGCTGGGAGTTCTGCCACTTTGACACCGGAAATATCAAACTTGGAGGATTCTACCTTCAAGGTTGGAAAACTTTCTGTTGAACAGAGGAAAGAAAAGATTCATAGATACATGAAGAAAAGGAATGAGAGAAACTTCAGCAAGAAAATCAAGTATGCTTGTCGGAAAACTCTAGCAGATAGCCGGCCACGGGTTAGAGGAAGGTTTGCAAAGAATGATGATTTTGGAGATACTCATAGACCTGCTAGTAGCAATCATGAAGAAGATGATGAAGAAGACGTAGTTGTGAAGGAAGAAGATGATATGGTTGATTCCTCAGATATTTTTGCTCATATCAGTGGAGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCCTGGATCTGA 1257 0.4431 MLFTMLLNHLVQDEISSPISARIFELCDPELFPETLQNSEVTSSSNCCYEENSSYTPNISLALDVDNKFSNSNTITTQTSANTTSTAPAAPTANTTTNNNTTNSSNLSIIFDSQDEIDNDISASIDFSTSPAFPVPPYLPVTTQQDQQFDFSSLQPQVTLAASSVVEGLAQYPTDSAVAPLMGAPLTTVFEEDCLSSVPSYVPLNPSSPSCSYLNPGIGPYMPLGPLNTALSADSSGIFGGSILLGSELQAQELDYQGENGGIYCPDSIQRVFNPPDLQALSAESQQLVAGAGSSATLTPEISNLEDSTFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTHRPASSNHEEDDEEDVVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5775g00009 418 MobiDBLite consensus disorder prediction 76 105 - -
Pral5775g00009 418 MobiDBLite consensus disorder prediction 358 377 - -
Pral5775g00009 418 Pfam CCT motif 320 362 IPR010402 GO:0005515
Pral5775g00009 418 ProSiteProfiles CCT domain profile. 320 362 IPR010402 GO:0005515
Pral5775g00009 418 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 79 379 IPR045281 GO:0009909
Pral5775g00009 418 MobiDBLite consensus disorder prediction 358 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5775g00009 Pral-Chr5775 33052 35533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5775g00009 320 378 C2C2-CO-like Transcription Factor Family AT5G57660 46.875 1.86e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral5775g00009 CCT 5.5e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5775g00009 - - aprc:113871720 596.275