Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5772g00002 ATGGCCGATTTTCAGACTTCTACCCACCGTGCCAAGTGGATCTTCACTCCTCCCCAACTGGCTGAAAAATATAAAGCTGCTAATCAGAGAGCAATACAAATTTTAGAGAAGCATGGAGCAACTCTTATGGAAGTAGATGTCGATGGGTCTTTGTCATATCCTTCACTTCAGAAAGATAATGCTGACAAGCATTCTCGCCCTAAACCCCTCAGTATTGAAGAGGAACAATGTATCCGAGTTTTTTACGAGAACAAATTACAAGAAGTGTGCAACAATTTTCACTTTCCTCATAAAATCCAGGCTACAGCGCTCATTTATTTTAAAAGGTTCTATCTACAGTGGTCGGTGATGGAACATCATCCAAAAAATATAATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAACCATGTATCTGCTGAGGAGCTTGGTAAGGGAATCTCACAGGATCACCAAATGATTCTCAATAATGAGATGATTGTCTATCAGAGCTTAGAATTTGACCTTATTGTGTATGCTCCGTACCGCTCAGTTGAAGGTTTTGTAAACAATATGGAGGAATTTTGCAAGGCTGGTGACGAAGTGCTTCCAATGTTGAAGGCCTTGCGAGACACTGCAAGATTGGAAATTGATAAAATGATGCTTACAGATGCTCCACTTTTGTTTCCTCCTGGCCAGTTGGGATTGGCTGCTTTGCGAAATTCAAATGCACTTCTTAAAGTTCTTGACTTTGACGGCTATCTAAGGAGCATCATTTCCCACCAGAACTCTACACATACTGTTCCTGAGCTTATTGGATTGCTGAATGCAATTGACTCGTTGGTAAAGAAATACAAATTTCCTTCAGAGAAGGAATTGAAGCATATCAACAGGAAATTGAAATCCTGTTGGGGTGTCAGCTCAAATGACGAGGGTAAAAAACGAGAGAAGAAATCAAAGCACAAATCCAAAAAGGGCTCCAATGAACCCCAAAATGTGCCTTCTCTCGCCTAA 999 0.4054 MADFQTSTHRAKWIFTPPQLAEKYKAANQRAIQILEKHGATLMEVDVDGSLSYPSLQKDNADKHSRPKPLSIEEEQCIRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMEHHPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSVEGFVNNMEEFCKAGDEVLPMLKALRDTARLEIDKMMLTDAPLLFPPGQLGLAALRNSNALLKVLDFDGYLRSIISHQNSTHTVPELIGLLNAIDSLVKKYKFPSEKELKHINRKLKSCWGVSSNDEGKKREKKSKHKSKKGSNEPQNVPSLA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5772g00002 332 SMART cyclin_7 84 165 IPR013763 -
Pral5772g00002 332 MobiDBLite consensus disorder prediction 299 332 - -
Pral5772g00002 332 Pfam Cyclin, N-terminal domain 77 171 IPR006671 -
Pral5772g00002 332 FunFam cyclin-H1-1 60 172 - -
Pral5772g00002 332 CDD CYCLIN_AcCycH_rpt1 3 171 - -
Pral5772g00002 332 CDD CYCLIN_AcCycH_rpt2 174 298 - -
Pral5772g00002 332 Gene3D - 174 279 - -
Pral5772g00002 332 Pfam Cyclin C-terminal domain 176 277 IPR031658 -
Pral5772g00002 332 Gene3D - 60 172 - -
Pral5772g00002 332 SUPERFAMILY Cyclin-like 176 301 IPR036915 -
Pral5772g00002 332 PANTHER CYCLIN 63 318 IPR043198 GO:0006357|GO:0016538
Pral5772g00002 332 FunFam Cyclin h 174 279 - -
Pral5772g00002 332 SUPERFAMILY Cyclin-like 63 173 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5772g00002 Pral-Chr5772 12942 17088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5772g00002 1 277 Core Cell Cycle Gene Families AT5G27620 67.266 1.97e-137 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5772g00002 K06634 - gmx:547736 541.962