Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5770g00044 | ATGGATCACCAAGGAGGGTATAGCGCAAACCCATCTATGGGGGTTATTGGTAGTGGGGCTCAGTTGCCTTATGGTTCTAATCCTTACCAGCCAAGCCAAATATCTGGGGCACCTGGTTCTGTCGTTACCTCAGTTGGGACTATTCAAACTACTGGTCAGCCTGCGGGAGCTCAGCTGGGACAACAACTTGCTTATCAGCATATTCATCAGCAGCAGCAGCAGCAACTTCAGCAACAACTCCAAAGCTTTTGGGCAACTCAATACCAAGAAATTGAGAGGGTAACTGACTTCAAGAACCACAGCCTTCCCTTGGCAAGGATCAAGAAGATTATGAAAGCCGATGAGGATGTTAGGATGATATCAGCTGAGGCACCTGTTATATTTGCAAGGGCATGTGAAATGTTCATATTAGAGTTGACCTTGCGTTCTTGGAACCACACTGAGGAAAACAAAAGGAGAACACTGCAAAAGAATGATATCGCAGCCGCAATCACAAGGACTGACATCTTTGATTTTTTAGTTGATATTGTGCCGCGGGAGGACTTGAAAGATGAAGTGCTTGCATCAATCCCTAGAGGAACCATGCCAGTTGCAGGGCCTGCTGATGCTCTTCCTTATGGCTATATGCCACCACAGCATGCTCCTCAAGTTGGCACTGCTGGGGTCATCATGGGTAGGCCTGTAATGGACCCAAGCATGTATGCTCAACAATCGAATCCCTACATGTCACAACAAATGTGGCCACAGCCGCAAGAGCAGCAACCATCATCTCCAGATCATTAG | 783 | 0.4725 | MDHQGGYSANPSMGVIGSGAQLPYGSNPYQPSQISGAPGSVVTSVGTIQTTGQPAGAQLGQQLAYQHIHQQQQQQLQQQLQSFWATQYQEIERVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYGYMPPQHAPQVGTAGVIMGRPVMDPSMYAQQSNPYMSQQMWPQPQEQQPSSPDH | 260 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5770g00044 | 260 | Gene3D | Histone, subunit A | 63 | 179 | IPR009072 | GO:0046982 | |
Pral5770g00044 | 260 | PANTHER | HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED | 66 | 230 | - | - | |
Pral5770g00044 | 260 | Pfam | Core histone H2A/H2B/H3/H4 | 64 | 164 | IPR007125 | GO:0003677 | |
Pral5770g00044 | 260 | SUPERFAMILY | Histone-fold | 60 | 173 | IPR009072 | GO:0046982 | |
Pral5770g00044 | 260 | FunFam | Nuclear transcription factor Y subunit gamma | 66 | 179 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5770g00044 | Pral-Chr5770 | 189743 | 192641 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5770g00044 | 17 | 247 | CCAAT-HAP5 Transcription Factor Family | AT1G08970 | 63.793 | 2.08e-89 | 263 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YC | Pral5770g00044 | CBFD_NFYB_HMF | 5.8e-18 | CL0012 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5770g00044 | K08066 | - | gmx:100527803 | 386.726 |