Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5770g00012 ATGGCCTATGATTTGAGTTCAGTACTCTCAAATTTGCAAATGGTATCCACATCTGATCATGCCTCCGTCGTCTCCATGAACCTATTCGTGGCACTGCTCTGTGCTTGCATCGTGATTGGCCATCTTCTTGAGGAGAACCGGTGGATGAATGAGTCCATCACTGCACTTTTAATTGGTCTTGGCACTGGTGTAGTAATTTTGCTGATTAGTGGTGGCAAAAGCTCACATCTTCTTGTTTTCAGTGAAGATCTTTTCTTCATATACATTCTGCCACCTATTATATTCAATGCCGGGTTTCAGGTGAAAAAGAAGCAGTTCTTTAAAAACTTTATCACCATCGTGTTGTTTGGTGCTGTTGGTACTTTGATATCTTGTACCGTCATAACATTGGGTGTTACGGAAGCTTTTAAATGGATGAATATTGGCTCAATGGATATAGGGGAATATCTTGCAATTGGTGCAATATTTGCTGCTACAGATTCTGTGTGCACGCTGCAGGTGCTAAATCAAGATGAGACTCCTTTACTCTACAGTCTTGTATTTGGGGAGGGAGTTGTTAATGATGCTACGTCAGTGGTGCTTTTCAATGCAATCCACGGCTTTGACCTCAATCATATTGACCTCAGAACTGCACTGCGTTTTTTGGGCAATTTCTTGTATCTGTTTGCTGCAAGCACAATGCTTGGGGTTTTGGCTGGTCTGCTTAGTGCGTACGTTATCAAAAAGCTGTATATTGGCAGGCACTCAACGGATCGTGAGGTGGCTCTTATGATGCTAATGGCATACCTTTCATACATGCTTGCTGAATTGTGCTATCTGAGTGGCATCCTCACTGTATTCTTTTGTGGGATTGTGATGTCACATTATACCTGGCATAATGTGACTGAAAGCTCGAGAGTCACTACAAAGCATGCTTTTGCAACATTGTCGTTTGTTGCTGAGACTTTCTTATTTCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAGTGGAGATTCGTCAGTGATAGCCCTGGCACATCAGTAGCAGTTAGTTCGATATTGCTGGGTCTGGTACTTGCTGGGAGAGCAGCTTTTGTTTTTCCATTATCCTTCTTATCCAATTTGGCTAAAAAGTCACCAAATGAGAAAATTTCCTTCCGGCAGCAAGTGATCATTTGGTGGGCCGGTCTTATGAGGGGTGCCGTTTCAATGGCACTTGCCTATAATCAGTTCACCATGTCTGGTCATACTCAACAGCGGGCCAATGCAATCATGATCACCAGCACCATTACTGTTGTGCTTTTCAGCACTGGGTTGTTCGGTTTGCTGACTAAGCCACTCATAAGGTTTTTGCTGCCTCATCCCAAGCATACTGCCAGCATGACAAGGGCAGATCCATCTAATCCAAAATCAGTTACTGCGCCGTTGCTTGGAGCTCCCCAAGATTCTGAAGCTGATCTTGATGGCCATATTCATCGTCCAAGCAGCATTCGTGCACTATTAAGCACCCCAACACACACTGTTCATCGTTACTGGCGAAAGTTTGATGATGCATTCATGCGTCCAGTTTTTGGTGGGAGGGGCTTTGTTCCTGTGGAGCCGGGTTCACCAACTGAAAGCAAGGGTCCTTATCACTGGCATGGGGAAGATAACCAAAGGAACATCTAA 1650 0.4406 MAYDLSSVLSNLQMVSTSDHASVVSMNLFVALLCACIVIGHLLEENRWMNESITALLIGLGTGVVILLISGGKSSHLLVFSEDLFFIYILPPIIFNAGFQVKKKQFFKNFITIVLFGAVGTLISCTVITLGVTEAFKWMNIGSMDIGEYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIHGFDLNHIDLRTALRFLGNFLYLFAASTMLGVLAGLLSAYVIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAETFLFLYVGMDALDIEKWRFVSDSPGTSVAVSSILLGLVLAGRAAFVFPLSFLSNLAKKSPNEKISFRQQVIIWWAGLMRGAVSMALAYNQFTMSGHTQQRANAIMITSTITVVLFSTGLFGLLTKPLIRFLLPHPKHTASMTRADPSNPKSVTAPLLGAPQDSEADLDGHIHRPSSIRALLSTPTHTVHRYWRKFDDAFMRPVFGGRGFVPVEPGSPTESKGPYHWHGEDNQRNI 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5770g00012 549 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5770g00012 549 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5770g00012 549 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5770g00012 549 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pral5770g00012 549 MobiDBLite consensus disorder prediction 524 549 - -
Pral5770g00012 549 PANTHER SODIUM/HYDROGEN EXCHANGER 16 518 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Pral5770g00012 549 Pfam Sodium/hydrogen exchanger family 30 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pral5770g00012 549 Gene3D - 145 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5770g00012 Pral-Chr5770 66588 73001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5770g00012 6 533 Antiporters AT3G05030 78.612 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5770g00012 - - qsa:O6P43_011160 878.626