Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5770g00008 ATGGGGTGTGTGATTAGTCGAGAAGTGTCATCGGGAATAATCTCTGAGGTGAAAGAGGAGAAGAATTTGAGTAGCGATTCGAGGAGGAAGGTAGATGAAACCTCTTCTCAGAACGTGGTAGAGGCTCAGAACGGTGGGAAACAAAAAGAAGAGAAGGGTGGTGGTGATGAAGGGATCCAGGCCCAACGGCCAAGGGGTGAAAGGAGAAGATCAAAGCCAAATCCAAGGCTAAGTAATCCTCCCAAACATGTGCGAGGAGAGCAAGTAGCAGCTGGATGGCCGCCCTGGCTTACGGCTGTTTGTGGTGAAGCGCTTAGTGGATGGATTCCCCGAAAGGCTGACACATTTGAGAAAATTGACAAGATTGGCCAAGGAACGTATAGCAATGTGTACAAGGCTAAAGATATGTTAACGGGTAAAATTGTCGCTCTTAAGAAGGTTCGATTCGACAATTTAGAGCCTGAGAGTGTAAAGTTCATGGCTAGAGAGATTCTTATTCTCAGAAGATTGGATCATCCCAATGTTGTAAAGTTGGAAGGTTTAGTTACATCAAGGATGTCATGTAGTTTGTATCTGGTATTTGATTACATGGTGCATGATTTGGCTGGACTTGCTGCAAGCCCAGGAATCAAGTTCACAGAGCCTCAGGTCAAATGTTACATGCATCAACTACTTTCTGGACTTGAGCATTGTCATGAACGGCACATACTTCACCGCGATATTAAAGGATCAAATCTTCTTATTGATGATGGTGGAGTACTTAAGATTGCTGATTTTGGACTGGCTTCTTTCTTTGATCCAAACCACAAACACCCCATGACTAGTCGTGTAGTTACACTTTGGTATCGGCCTCCTGAGTTGCTTCTTGGTGCCACGGATTATGGTGTGGGTATTGACCTCTGGAGTGCAGGTTGTATTTTAGGGGAGTTATTGGCCAGGAAGCCAATTATGCCTGGTCGTACAGAGGTAGAGCAACTGCATAAAATATACAGATTATGTGGCTCCCCGTCTGATGAGTATTGGAAGAAGTCAAAGTTGCCTCATGCTACCTTATTTAAACCTCGTGAGCCATACAAGAGATGCATAAGGGAGACATTTAAGGATTTTCCACCGTCTGCTCTGCCCCTTATTGATACTCTTCTTGCTATTGATCCAGCAGAAAGGAAGACAGCCTCAGATGCGTTAAAAAGTGAGTTCTTCACAACAGAACCATTTGCTTGTGATCCTCCTAGTCTTCCAAAATATCCCCCAAGCAAGGAAATGGATGCTAAACGACGAGATGATGAAGCAAGGAGATTGAGAGCTGCAAGCAAAGCTCAGATCGATGGTGCAAAGAAACCACGAACACGTGAACGTGCTAAAGCTATTCCTGCCCCTGAAGCCAATGCTGAGCTTCAGTCTAATATTGACAGAAGGCGTCTAATCAGCCACGCGAATGCCAAGAGCAAGAGTGAAAAGTTTCCTCCGCCACATCAAGATGGACAACTTGGGTATCCTTTGGGAGCTTCGAATCATATAGATCCTGACATTGTTCCTCCTGATGTCGCTTTCAGTTCAACTTCATTTACTTATTCAAAGGAACCATTCCAAGCTTGGTCAGGTCCCATAGGTAATACTGCTGCCATTGATGCACCAAAGAAGAAGAAGAAACACACAGCAGCTGATACGTTGGATTTATCAAAATCACACAGAGTTTGCACAAAGGATAAGGTTAAAGGAAAGAAAATCAAAGCCTAG 1737 0.4427 MGCVISREVSSGIISEVKEEKNLSSDSRRKVDETSSQNVVEAQNGGKQKEEKGGGDEGIQAQRPRGERRRSKPNPRLSNPPKHVRGEQVAAGWPPWLTAVCGEALSGWIPRKADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFDYMVHDLAGLAASPGIKFTEPQVKCYMHQLLSGLEHCHERHILHRDIKGSNLLIDDGGVLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGIDLWSAGCILGELLARKPIMPGRTEVEQLHKIYRLCGSPSDEYWKKSKLPHATLFKPREPYKRCIRETFKDFPPSALPLIDTLLAIDPAERKTASDALKSEFFTTEPFACDPPSLPKYPPSKEMDAKRRDDEARRLRAASKAQIDGAKKPRTRERAKAIPAPEANAELQSNIDRRRLISHANAKSKSEKFPPPHQDGQLGYPLGASNHIDPDIVPPDVAFSSTSFTYSKEPFQAWSGPIGNTAAIDAPKKKKKHTAADTLDLSKSHRVCTKDKVKGKKIKA 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5770g00008 578 PANTHER CELL DIVISION PROTEIN KINASE 114 404 - -
Pral5770g00008 578 Gene3D Transferase(Phosphotransferase) domain 1 199 440 - -
Pral5770g00008 578 SUPERFAMILY Protein kinase-like (PK-like) 111 408 IPR011009 -
Pral5770g00008 578 ProSiteProfiles Protein kinase domain profile. 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5770g00008 578 CDD STKc_CDK9_like 116 400 - -
Pral5770g00008 578 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Pral5770g00008 578 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Pral5770g00008 578 Gene3D Phosphorylase Kinase; domain 1 103 198 - -
Pral5770g00008 578 MobiDBLite consensus disorder prediction 418 457 - -
Pral5770g00008 578 MobiDBLite consensus disorder prediction 19 35 - -
Pral5770g00008 578 MobiDBLite consensus disorder prediction 19 88 - -
Pral5770g00008 578 FunFam probable serine/threonine-protein kinase At1g54610 103 198 - -
Pral5770g00008 578 FunFam probable serine/threonine-protein kinase At1g54610 199 440 - -
Pral5770g00008 578 Pfam Protein kinase domain 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5770g00008 578 MobiDBLite consensus disorder prediction 45 74 - -
Pral5770g00008 578 MobiDBLite consensus disorder prediction 407 471 - -
Pral5770g00008 578 SMART serkin_6 116 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5770g00008 Pral-Chr5770 41996 46818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5770g00008 108 440 Core Cell Cycle Gene Families AT5G10270 52.149 5.27e-121 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral5770g00008 Pkinase 1.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5770g00008 K08819 - gmx:100817289 982.245