Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5770g00001 ATGAAGAACATTTTCAAGAAGCTTCAAGGGAGCAATCACGACCCTAATCGATCCAATGAAACACCGGCTTCTGTCACATCTCCTTCGGTGCCTCCATCAACGTACTGCACCCCTTCAAAACTCTGCCTGTCTCCGGCTAGTCCCCCTTCATTGTCTCCCTCTACGGCAGCGGCCGGTGCTTCCCAACCCCCACCAGCTACGCCCAATCGACAAGACTATTTCGTCGAGGAGGAGGAGTATCAGGTTCAGCTTGCCCTAGCCATCAGCGCCTCCAAGTCTGATTTTCGGGATGATCCTGAGAAGGATCAGATCCGAGCGGCGACGCTACTGAGCCTGGGAGGCCATCGAATTGATACAGCAAGGAATCATGATGATGTGGCGAAGGCGCTGTCCAGACAGTATCAGGAATACAATGTGCTTGACTATGAGGAGAAAGTAGTTGATGGTTTTTATGATGTGTATGGTCTTTCCACTGATTCATCAATGCAAGGAAAGATGCCCTCTCTGGAAGACCTTGAAGCAAATGCGGGAAATTCAAGTTTTGAAGTTGTCATAGTGAATCAGGCAATTGATCCTGCCCTGGAAGAGTTGGTGCAAATTGCACAGTGTGTAGCATTAGATTGTCCTGTCACTGATGTTGGTGTTTTGGTGCAAAGACTGGCTGAACTTGTTACAGGGCATATGGGTGGCCCTGTAAAGGATGCTAATATTATATTAGCAAGATGGACCGAAAGAAGTACTGAGCTACGGACATCTCTTCACACAAGTGTATTACCTATAGGGTCCATAAATATTGGCCTGTCCAGGCATCGTGCTTTGCTTTTCAAGGTATTGTCTGACAAGATCAAGATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTTATGGCTGCTCCTGGTACACTTATTCCGACTGATATTTTTAATCCTAATGACCCTTCATTTAAGCCATACAATCCCAAGAATTTTCCAACCTTACAATCCACAAATGAAAGTAGATTTCCTTACTCAAGGCCTATGCCATCTGATGGTGAAGGCAGTAGTCAAAGTTCTGCGATCAGAAGTGATTCATCATTATCGAATGTAAGACCATATTTTGTGAAGCCTGATTATATGTCTCCAAACTTGAGTTTGGGTGGAGAAACTGGCATTGGTCCTTCCAAAGTTCCTAGTAAAGCTACTTCTACCCAAGTGGACAATTTTCTTCCATCAGCCAGTAGTTCTCTGTACAAGGGAACTCGAGGGATGAATGCTATTGGTGATGGGACTAGACTGAATGTCAATGTTGTACCATATGGTCAGAATGGTCCAGATGACTCTGGGAATCTCTTTGCAGATCTTAACCCATTCCTGATAAAAGGAACGGGCAAGACTGCTGTACATAACAAACCTGTGGAAAATAAGGCTCCCGAACTTCATAGTACTAAAGAAAACAATTTTGCTGGTCGCCCCCCAGTACCTTTGATGTGGAAGAACCGGTATGTTTACAATGAAGTTCCCAGGAAACCTAACCGTAATCCTAATGAGTATAACCCTTCTTCATTAGCTTCCAATAGTTCTTCTGTATCAGAAAAAAATGATGTCAATAGTTCCAACTCATCATACTATGCAAATGTTCATAGAGATAAAGATAGGGGCTTGAAGCAAGTTATTGGTACAGTGTCAGCGACTGGTTCTGGTGATCTGAACAAGGTTGAAGATTTCAGTGCTGAATGGAACAGAGGGAATGTCGAAAAATCTCAAAGCAACATAGTAGATGTTGTCAAAGAACAGGAAAACTGTGAAATTGGATTTCATGACCGGAGAATAAGCACGCATGACAGATTCATGACGAGCAATTTGAAACTAAAAGAGTCGGAGAGCCCTAGTTCGTCAATTGATTCCATGACAAATAGGGTTGACCAAATCTTGGATGATGTCGATGTGGGTGAATGTGAAATTCCATGGGAGGATCTGGTTCTTGGTGAAAGAATTGGTCTAGGTTCATATGGCGAGGTATATCATGCTGACTGGAATGGCACAGAAGTTGCTGTGAAGAAGTTTCTGGATCAGGATTTCTCAGGTGCTGCCTTGGCTGAATTCAAAAGAGAAGTAAGGATAATGCGTAGACTGCGGCATCCGAATGTTGTTCTTTTTATGGGCGCTGTTACTCGACCTCCTAATCTCTCAATCATTACAGAGTTTCTTCCTAGGGGAAGCTTGTACCGAATTCTTCATCGTCCTAATTGTCAGATTGATGAGAAACGCAGAATTAAAATGGCTCTGGACGTGGCTAGGGGCATGAATTGCTTACACACCAGCACGCCTACGATCGTTCACCGTGATCTGAAGTCACCAAATCTTTTGGTTGATAAGAACTGGAATGTTAAGGTTTGTGATTTTGGTTTGTCAAGATTGAAGCACAACACGTTTTTATCATCCAAGTCAACTGCTGGAACGCCTGAATGGATGGCTCCTGAAGTTCTTCGCAATGAACCCTCAAATGAGAAGTGTGATGTATACAGTTTCGGAGTCATTCTATGGGAGCTTGCTACTCTAAAGTTGCCGTGGAGTGGGATGAATCCTATGCAAGTTGTTGGTGCTGTAGGTTTCCAAAATCGTCGTTTAGATATCCCCAAAGAAGTTGATCCTTTAGTTGCAAGAATTATCTGGGAATGTTGGCAACAGGATCCCAATTCTCGACCCTCATTTGCCCAGCTCACGGTAGCGCTAAAGCCCCTGCAGCGTCTGGTAATGCCGTCTCATCAAGATCAGCCAGCTACACATTTGGCGCAGGAGATTTCTGTAAATTCTACCCCTTGA 2868 0.439 MKNIFKKLHXGSNHDPNRSNETPASVTSPSVPPXSTYCTPSKLCLSPASPPSLSPSTAAAGASQPPPATPNRQDYFVEEEEYQVQLALAISASKSDFRDDPEKDQIRAATLLSLGGHRIDTARNHDDVAKALSRQYQEYNVLDYEEKVVDGFYDVYGLSTDSSMQGKMPSLEDLEANAGNSSFEVVIVNQAIDPALEELVQIAQCVALDCPVTDVGVLVQRLAELVTGHMGGPVKDANIILARWTERSTELRTSLHTSVLPIGSINIGLSRHRALLFKVLSDKIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPTDIFNPNDPSFKPYNPKNFPTLQSTNESRFPYSRPMPSDGEGSSQSSAIRSDSSLSNVRPYFVKPDYMSPNLSLGGETGIGPSKVPSKATSTQVDNFLPSASSSLYKGTRGMNAIGDGTRLNVNVVPYGQNGPDDSGNLFADLNPFLIKGTGKTAVHNKPVENKAPELHSTKENNFAGRPPVPLMWKNRYVYNEVPRKPNRNPNEYNPSSLASNSSSVSEKNDVNSSNSSYYANVHRDKDRGLKQVIGTVSATGSGDLNKVEDFSAEWNRGNVEKSQSNIVDVVKEQENCEIGFHDRRISTHDRFMTSNLKLKESESPSSSIDSMTNRVDQILDDVDVGECEIPWEDLVLGERIGLGSYGEVYHADWNGTEVAVKKFLDQDFSGAALAEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIITEFLPRGSLYRILHRPNCQIDEKRRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLKLPWSGMNPMQVVGAVGFQNRRLDIPKEVDPLVARIIWECWQQDPNSRPSFAQLTVALKPLQRLVMPSHQDQPATHLAQEISVNSTP 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5770g00001 957 MobiDBLite consensus disorder prediction 337 379 - -
Pral5770g00001 957 FunFam Serine/threonine-protein kinase CTR1 755 938 - -
Pral5770g00001 957 CDD STKc_MAP3K-like 682 925 - -
Pral5770g00001 957 MobiDBLite consensus disorder prediction 528 561 - -
Pral5770g00001 957 Gene3D Transferase(Phosphotransferase) domain 1 755 939 - -
Pral5770g00001 957 MobiDBLite consensus disorder prediction 1 74 - -
Pral5770g00001 957 Pfam Ethylene-responsive protein kinase Le-CTR1 129 327 - -
Pral5770g00001 957 Pfam Protein tyrosine and serine/threonine kinase 677 926 IPR001245 GO:0004672|GO:0006468
Pral5770g00001 957 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 198 934 - -
Pral5770g00001 957 MobiDBLite consensus disorder prediction 487 508 - -
Pral5770g00001 957 PRINTS Tyrosine kinase catalytic domain signature 750 763 IPR001245 GO:0004672|GO:0006468
Pral5770g00001 957 PRINTS Tyrosine kinase catalytic domain signature 836 846 IPR001245 GO:0004672|GO:0006468
Pral5770g00001 957 PRINTS Tyrosine kinase catalytic domain signature 855 877 IPR001245 GO:0004672|GO:0006468
Pral5770g00001 957 PRINTS Tyrosine kinase catalytic domain signature 789 807 IPR001245 GO:0004672|GO:0006468
Pral5770g00001 957 PRINTS Tyrosine kinase catalytic domain signature 899 921 IPR001245 GO:0004672|GO:0006468
Pral5770g00001 957 ProSitePatterns Protein kinases ATP-binding region signature. 682 704 IPR017441 GO:0005524
Pral5770g00001 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Pral5770g00001 957 SUPERFAMILY Protein kinase-like (PK-like) 666 943 IPR011009 -
Pral5770g00001 957 MobiDBLite consensus disorder prediction 15 70 - -
Pral5770g00001 957 FunFam Serine/threonine-protein kinase isoform 1 667 754 - -
Pral5770g00001 957 MobiDBLite consensus disorder prediction 523 564 - -
Pral5770g00001 957 ProSiteProfiles Protein kinase domain profile. 676 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5770g00001 957 MobiDBLite consensus disorder prediction 339 379 - -
Pral5770g00001 957 SMART serkin_6 676 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5770g00001 957 Gene3D Phosphorylase Kinase; domain 1 669 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5770g00001 Pral-Chr5770 356 12860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5770g00001 1 912 MAP Kinase Kinase Kinase AT1G08720 57.717 0.0 969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral5770g00001 PK_Tyr_Ser-Thr 3.5e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5770g00001 - - aprc:113870732 1385.55