Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5762g00040 ATGCAAAGTGCAGGGGCTGTGTGGTGGGGAGGCGGAGAAAACGATGTGAAGGTGGAGGATATACAAGTGGATCCTCCGAAACCAACCGAAGTTCGGGTCAAGATGCTCTGTGCTAGTGTCTGCCACACCGACCTCACTAGGGCCAGAGGACAGCCATTACCTCTGTTCCCCCGAGTATTAGGCCATGAAGGAGTTGGTGTTGTTGAGAGCACTGGGGAGAGAGTAACAGATCTGGAAGTAGGCGATGTTGTTATTCCTACATCTATCGGTGAATGTCAAGAATGTGAGAACTGCATTTCAGGGGAATCCAACCTGTGCCTGAAATACCCTCTTACGTTAAATGGCTTAATGCTGGATAACACATCAAGGATGTCCATTAGAGGTCAAAAGATATACCAACTTTTTAGCTGCTCCACGTTTGCAGAATACATGGTAACTGAAGCAAATTACCTCGTCAAAGTTGATCCCAACATTGACCTTGCCCATGCTAGCATCATCTCGTGTGGGTTTTCTACTGGTTTTGGAGCTGTTTGGAAGGAAGCAAAGGTTGAAAGAGGATCATCCGTAGCTGTGTTTGGCCTTGGTGGTGTTGGATTAGGTGCTATAAGCGCAGCCAAGATGATGGGGGCAAGTAAGATAATTGGGATTGACAAGAATGAAATGAAGAAATCAAAAGGAGAAGCTTTTGGAATGACAGATTTTATCAATCCTGATGCCTGTGATAAATCAGTTTCAGAGTTGCTTAAGGAACTGAGTAATGGAATGGGTGTAGACTGTTCCTTTGAGTGCACTGGAGTTGCCTCTTTACTTACTCAAGCCTTTCAAGCCACGAAATTGGGAAAGGGAAAGACAATAGCAATAGGTGCGGTATCTCAAGAATTTGTGCATATCGACTTTTCCTCGCTTATATTTGGGAGAACTTTAAAAGGTTCCATTTTTGGAGGATTGAAACCTAAATCTGATCTGCCCTTCATAGTTGACAAATGCTTGAAAAAGGAGTTCCCTCTTGACGAATTTCTTACTCATGAGGTGTCACTAGAAGAGATGGGTAAAGCTTTGGAGCTACTAAAACAACCAGACTGTGTCAAAGTTATCATAAGGATATCTATATGA 1113 0.4358 MQSAGAVWWGGGENDVKVEDIQVDPPKPTEVRVKMLCASVCHTDLTRARGQPLPLFPRVLGHEGVGVVESTGERVTDLEVGDVVIPTSIGECQECENCISGESNLCLKYPLTLNGLMLDNTSRMSIRGQKIYQLFSCSTFAEYMVTEANYLVKVDPNIDLAHASIISCGFSTGFGAVWKEAKVERGSSVAVFGLGGVGLGAISAAKMMGASKIIGIDKNEMKKSKGEAFGMTDFINPDACDKSVSELLKELSNGMGVDCSFECTGVASLLTQAFQATKLGKGKTIAIGAVSQEFVHIDFSSLIFGRTLKGSIFGGLKPKSDLPFIVDKCLKKEFPLDEFLTHEVSLEEMGKALELLKQPDCVKVIIRISI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5762g00040 370 Gene3D - 173 311 - -
Pral5762g00040 370 Pfam Zinc-binding dehydrogenase 196 315 IPR013149 -
Pral5762g00040 370 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 61 75 IPR002328 GO:0008270|GO:0016491
Pral5762g00040 370 SUPERFAMILY GroES-like 319 366 IPR011032 -
Pral5762g00040 370 SMART PKS_ER_names_mod 12 366 IPR020843 GO:0016491
Pral5762g00040 370 FunFam alcohol dehydrogenase 1-like isoform X1 12 172 - -
Pral5762g00040 370 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 331 IPR036291 -
Pral5762g00040 370 CDD liver_alcohol_DH_like 6 367 - -
Pral5762g00040 370 SUPERFAMILY GroES-like 2 184 IPR011032 -
Pral5762g00040 370 PANTHER ALCOHOL DEHYDROGENASE 5 360 - -
Pral5762g00040 370 Pfam Alcohol dehydrogenase GroES-like domain 29 154 IPR013154 -
Pral5762g00040 370 FunFam S-(hydroxymethyl)glutathione dehydrogenase 173 311 - -
Pral5762g00040 370 Gene3D - 7 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5762g00040 Pral-Chr5762 266480 268982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5762g00040 30 308 Monolignol Biosynthesis Gene Families AT4G37980 28.369 3.69e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5762g00040 K00121 - qsa:O6P43_001731 511.531