Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5762g00030 ATGGCTGAAGCTTCAAGAAGCCTTTACGCCACCGCTGTCATTCCCAGTTTCAGCCCGACCAACAAAACTCATGTGATTCAGCGTCATCTAACTCTCCCGCGAAAGCCCCAATTTCAGTGTTTGGTTTCTGCAAGTGATGCCGCGAAAACTGCCGCGAAAGAAACCATCCCATGGGGCTGTGAGATTGACTCCCTGGAAAACGCATCGGCTCTGCAGAGATGGTTGTCTGAGTCAGGCCTCCCGCCACAGAAGATGGCCATTGAAAGGGTGAATGTCGGGGAGAGAGGACTCGTTGCCTTGAAGAATATAAGGAAGGGAGAGAAGTTGCTCTTTGTGCCTCCTTCACTAGTCATCACTGCGGATTCTCAATGGACCTGCCCTGAAGCTGGTGAAATTTTGAAAAGGAATTCGGTGCCAGACTGGCCACTGCTTGCGACTTATCTCATCAGTGAAGCAAGCCTCATGAAATCTTCAAGATGGAGCAGTTACGTTTCAGCCTTACCACGGCAACCCTATTCACTTCTTTACTGGTCACAAGCAGAACTAGATCGTTATTTGGAAGCTTCACAGATTAGGGAGAGAGCAATTGAAAGGATTAATAATGTTATTGGAACATACAACGATTTGAGGCTCAGAATATTTTCCAAGCATCCTAGTTTATTCCCTGAAGAGGTGTTCAACATTGAGACCTTCAAGTGGTCATTTGGTATTCTTTTCTCTCGATTGGTCCGACTGCCCTCAATGGATGACAAGTTTGCCTTGGTTCCCTGGGCAGATATGCTGAACCATAGCTGTGATGTGGAAACGTTTTTGGATTATGATAAATCATCAAAGGGAGTTGTCTTTACCACAGATCGTCCCTACCAACCAGGTGAGCAGGTGTTTATATCGTATGGCAAGAAATCTAACGGAGAGCTTTTGCTCTCTTACGGATTCGTTCCAAAGGAAGGCACTAATCCTAGTGATTCGGCTGAGTTGTTATTGTCACTCAGGAAATCTGATAACTGCTACGAGGAGAAGTTACAACTTTTGAAGAAAAATGGACTGGCAGCATCACAGTGCTTCCCTGTAAAAGTTACTGGTTGGCCATTGGAGCTAATGGCATACGCCTATTTGGCTGTGGGCCCGCCAAGCATGAGAGGCCAATTTGAAGAGATGGCTGCTGCAGCATCGAATAAGACAACTGTAAAGAAGGATTTGAGATATCCTGAAATAGAAGAGCAAGCATTGCAATTTATTCTAGACAGCTGTGAATCCAGCATATCAAAGTACAAGAAGTTTTTACAGGAAAGTGGATCACTTGATTTGGACGTGACTTCTCCAAAACAACTCAACCGACGACTCTTTTTGAAGCAACTAGCTGTGGACTTGTGCAATAGCGAGCAAAGAGTACTATTTCGCGCTCAATATATACTGCGGAGCAGACTGAGGAATATGAGGACCGGTGGATTAAGAGCCCTACAAATTTTCAATGGGTTTAGGAATCTTTTCCAATGA 1497 0.4502 MAEASRSLYATAVIPSFSPTNKTHVIQRHLTLPRKPQFQCLVSASDAAKTAAKETIPWGCEIDSLENASALQRWLSESGLPPQKMAIERVNVGERGLVALKNIRKGEKLLFVPPSLVITADSQWTCPEAGEILKRNSVPDWPLLATYLISEASLMKSSRWSSYVSALPRQPYSLLYWSQAELDRYLEASQIRERAIERINNVIGTYNDLRLRIFSKHPSLFPEEVFNIETFKWSFGILFSRLVRLPSMDDKFALVPWADMLNHSCDVETFLDYDKSSKGVVFTTDRPYQPGEQVFISYGKKSNGELLLSYGFVPKEGTNPSDSAELLLSLRKSDNCYEEKLQLLKKNGLAASQCFPVKVTGWPLELMAYAYLAVGPPSMRGQFEEMAAAASNKTTVKKDLRYPEIEEQALQFILDSCESSISKYKKFLQESGSLDLDVTSPKQLNRRLFLKQLAVDLCNSEQRVLFRAQYILRSRLRNMRTGGLRALQIFNGFRNLFQ 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5762g00030 498 ProSiteProfiles SET domain profile. 83 299 IPR001214 GO:0005515
Pral5762g00030 498 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 66 434 - -
Pral5762g00030 498 SMART set_7 83 305 IPR001214 GO:0005515
Pral5762g00030 498 CDD SET_RBCMT 82 313 IPR044431 GO:0016279|GO:0018022
Pral5762g00030 498 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 51 312 - -
Pral5762g00030 498 Pfam SET domain 95 299 IPR001214 GO:0005515
Pral5762g00030 498 Gene3D - 318 481 IPR036464 -
Pral5762g00030 498 FunFam Rubisco methyltransferase family protein 318 481 - -
Pral5762g00030 498 PIRSF RMT_SET 1 495 IPR011192 GO:0009507|GO:0030785
Pral5762g00030 498 Gene3D set domain protein methyltransferase, domain 1 36 312 - -
Pral5762g00030 498 Pfam Rubisco LSMT substrate-binding 332 465 IPR015353 -
Pral5762g00030 498 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 329 483 IPR036464 -
Pral5762g00030 498 SUPERFAMILY SET domain 67 316 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5762g00030 Pral-Chr5762 182239 187517 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral5762g00030 SET 7.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5762g00030 - - gmx:100803319 828.935