Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5759g00011 ATGAACCGTGGGGTTCTTGATTCTGTGATAAATAGGCTACTTGAAGTCAGAGGGAGACCTGGGAAGCTGGTGAATCTCTCGGAAACAGAAATCAGGCAGCTCTGTTTTGTCTCGAGGGATATCTTCTTGAGGCAGCCCAATCTGTTGGAACTTGAAGCTCCAATTAAGATCTGCGGAGACATTCATGGTCAATATCCTGACCTGCTGAGACTTCTTGAGCATGGCGGATCACCCCCTCGGTCCAATTACTTGTTCTTAGGGGATTATGTGGATCGCGGCAAGCAGAGTCTGGAGACAATTTGTCTTCTTCTTGCCTATAAAATAAAGTACCCCGATAACTTCTTCCTTCTGAGGGGCAATCATGAATGTGCTTCTATCAACCGTGTCTATGGATTCTATGACGAATGTAAGCAAAGATACAACGTCAAGCTCTGGAAAGTATTCACAGAATGTTTCAACTGCTTGCCCGTGGCAGCTCTTATAGATGAAAAAATACTGTGCATGCACGGTGGACTCTCCCCTGATTTGTACAACTTAAATCAGATCAGGGCTTTACCTCGTCCATGTCAAGTTCCAGAAAGCGGTCTGCTGTGTGATCTCCTTTGGTCTGATCCTTGTAAAGGCATTTATGGGTGGGGAGCGAATGAACGTGGCGTTTCGTATACTTTTGGTGCTGACAGGGTGACAGAATTTCTGCGAAAGAATGATCTGGACTTAATCTGTAGAGCTCATCAGGTTGTGGAAGATGGATATGAATTCTTTGCTAATAGACAGCTTGTGACTGTATTCTCAGCACCAAATTACTGTGGAGAGTTTGACAATGCCGGTGCCATGATGAGTGTGGATGAGACACTTACGTGCTCTTTTCAGATTTTAAGGCCTATGGAGAAAAAACCCAAGTTTAGCTTCGGAGGCACTGCTACAGTCAGGCCTAGTGCTCCCACTAAAATAAAGGCATTTCTTGGTGTCTAG 972 0.4496 MNRGVLDSVINRLLEVRGRPGKLVNLSETEIRQLCFVSRDIFLRQPNLLELEAPIKICGDIHGQYPDLLRLLEHGGSPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPDNFFLLRGNHECASINRVYGFYDECKQRYNVKLWKVFTECFNCLPVAALIDEKILCMHGGLSPDLYNLNQIRALPRPCQVPESGLLCDLLWSDPCKGIYGWGANERGVSYTFGADRVTEFLRKNDLDLICRAHQVVEDGYEFFANRQLVTVFSAPNYCGEFDNAGAMMSVDETLTCSFQILRPMEKKPKFSFGGTATVRPSAPTKIKAFLGV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5759g00011 323 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Pral5759g00011 323 FunFam Serine/threonine-protein phosphatase 1 303 - -
Pral5759g00011 323 SMART pp2a_7 26 296 IPR006186 GO:0016787
Pral5759g00011 323 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Pral5759g00011 323 SUPERFAMILY Metallo-dependent phosphatases 18 297 IPR029052 -
Pral5759g00011 323 CDD MPP_PP1_PPKL 5 294 - -
Pral5759g00011 323 Gene3D - 2 305 IPR029052 -
Pral5759g00011 323 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Pral5759g00011 323 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Pral5759g00011 323 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Pral5759g00011 323 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Pral5759g00011 323 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Pral5759g00011 323 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Pral5759g00011 323 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Pral5759g00011 323 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Pral5759g00011 323 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 10 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5759g00011 Pral-Chr5759 54789 58030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5759g00011 20 239 Calmodulin-binding Proteins AT5G63870 32.443 2.89e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5759g00011 K06269 - gmx:100791655 576.244