Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5758g00001 ATGGATGGTCACAAGGGAAAGCAGGAGAAGGCGAAGGATGAGACAAGGTACCGGGGTGTCCGGAGGCGGCCATGGGGGAAGTACGCGGCGGAGATTAGGGATCCGTCGAAGCAAGGGGCGAGGCTGTGGCTGGGGACGTTTGATACGGCGGAAGAAGCAGCCAGAGCCTACGATAGGGCTGCCTTCAACATGAGGGGTCATCTTGCAATCCTTAATTTCCCTAATGAGTATTATTCTCAGCTGATGCCCCCAGCATGTGGTCCCTTTTGGCCGCCTCCTTCTTCTTCGTCTTCTCACGGTCCTGTAAGTGCAGGCCCATCGTCTGGTCCGCTGCGGAAGCAAGTTTTTGAGTTTGAGTATCTGGATAATCAGGTGCTCGAAGACCTGCTAGAATCAGAAGAGGAGAAGAAGAGAAGAATGCGGGATTGA 429 0.5408 MDGHKGKQEKAKDETRYRGVRRRPWGKYAAEIRDPSKQGARLWLGTFDTAEEAARAYDRAAFNMRGHLAILNFPNEYYSQLMPPACGPFWPPPSSSSSHGPVSAGPSSGPLRKQVFEFEYLDNQVLEDLLESEEEKKRRMRD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5758g00001 142 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Pral5758g00001 142 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Pral5758g00001 142 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Pral5758g00001 142 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Pral5758g00001 142 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Pral5758g00001 142 Coils Coil 123 142 - -
Pral5758g00001 142 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Pral5758g00001 142 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
Pral5758g00001 142 PANTHER DNA-BINDING DOMAIN 8 134 IPR044808 GO:0003700|GO:0009873
Pral5758g00001 142 Pfam AP2 domain 15 67 IPR001471 GO:0003700|GO:0006355
Pral5758g00001 142 MobiDBLite consensus disorder prediction 90 109 - -
Pral5758g00001 142 FunFam Ethylene-responsive transcription factor 2 15 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5758g00001 Pral-Chr5758 4132 4560 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5758g00001 14 137 AP2-EREBP Transcription Factor Family AT3G23230 67.742 2.50e-49 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral5758g00001 AP2 1.5e-17 CL0081