Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5757g00013 ATGGAGGGACATGCGTCGGGATCTCGAAAGGCCAAGGACGCGGAAGGTGGCGGAGATGTCCGGTACCGGGGAGTGAGGCGTCGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGGGACTCGGCGAGGCAGGGCCAGAGGGTGTGGCTGGGGACTTTCAACACGGCGGAGGATGCCGCCAGGGCCTACGACCGAGCCGCTTATGCCATGAGAGGCCCATTTGCTATCCTCAACTTCCCCGATGAATACCCACTTTCGGCCGGCGGTGCTGACGCCATGGACAGTTATCGTTCCTCTGCTTCTTCCCCGACGATTAGTAATGCGCAAGGAAAACAAGTGTTCGAGTTCGAGTATTTGGATGATAAATTGCTGGAGGAGCTTCTTGATTTTGAAGAGAAAAAGATGACGGGAGATTGA 414 0.5749 MEGHASGSRKAKDAEGGGDVRYRGVRRRPWGKFAAEIRDSARQGQRVWLGTFNTAEDAARAYDRAAYAMRGPFAILNFPDEYPLSAGGADAMDSYRSSASSPTISNAQGKQVFEFEYLDDKLLEELLDFEEKKMTGD 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5757g00013 137 Gene3D AP2/ERF domain 20 80 IPR036955 GO:0003700|GO:0006355
Pral5757g00013 137 MobiDBLite consensus disorder prediction 1 22 - -
Pral5757g00013 137 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Pral5757g00013 137 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Pral5757g00013 137 FunFam Ethylene-responsive transcription factor 2 21 80 - -
Pral5757g00013 137 Pfam AP2 domain 21 71 IPR001471 GO:0003700|GO:0006355
Pral5757g00013 137 SUPERFAMILY DNA-binding domain 21 81 IPR016177 GO:0003677
Pral5757g00013 137 SMART rav1_2 21 85 IPR001471 GO:0003700|GO:0006355
Pral5757g00013 137 CDD AP2 21 80 IPR001471 GO:0003700|GO:0006355
Pral5757g00013 137 ProSiteProfiles AP2/ERF domain profile. 21 79 IPR001471 GO:0003700|GO:0006355
Pral5757g00013 137 PANTHER DNA-BINDING DOMAIN 12 131 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5757g00013 Pral-Chr5757 99001 99414 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5757g00013 21 133 AP2-EREBP Transcription Factor Family AT3G23230 60.833 1.14e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral5757g00013 AP2 1.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5757g00013 - - gmx:100775830 170.244