Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5757g00002 ATGAATAGTTCAGAGAATTCGAGCGAAGAGACTGATCAGCTGGAAGATGCAGATTCAGGAGGGATCAGACGATCTTACGAGTGCACATTTTGCAGAAGGGGCTTCACCAACGCTCAGGCGTTAGGGGGTCACATGAATATTCATAGAAAAGACAGAGCCAAAGCCAAACAAAGTACTCCTAATTCTTCTCTTTCAAACAGATTTTCCAATGAGGAGTCCTTTGCATCAGCCTCCCCTTTTCTTTCAGAAATATCTTCAGGCCAACAATCCTCAAAGTTATACTCCATTTTCGAGGTTCAGGGAAACTATAACATGTATTTCCAGCCATCTTCTGCAACAAACCCTGGAGACCCTTCTCCTGCACCATATGCCTTCCCCTTTGAGTATCTTAATCCGAGGTCCCATCGTCAGTCTGTGGATGTGAACCCAGAGCTTCTAGGGGCCAATTTGAGCCTCCAGATTGGTCCAAGTCATGTGGAAAGTAATCAGAAAGACGGCGAAGTGGACTTAGAGCTCAGACTTGGCCATCATCCCTATTGA 540 0.4556 MNSSENSSEETDQLEDADSGGIRRSYECTFCRRGFTNAQALGGHMNIHRKDRAKAKQSTPNSSLSNRFSNEESFASASPFLSEISSGQQSSKLYSIFEVQGNYNMYFQPSSATNPGDPSPAPYAFPFEYLNPRSHRQSVDVNPELLGANLSLQIGPSHVESNQKDGEVDLELRLGHHPY 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5757g00002 179 SUPERFAMILY beta-beta-alpha zinc fingers 24 52 IPR036236 -
Pral5757g00002 179 Gene3D Classic Zinc Finger 4 79 - -
Pral5757g00002 179 ProSiteProfiles Zinc finger C2H2 type domain profile. 26 53 IPR013087 -
Pral5757g00002 179 MobiDBLite consensus disorder prediction 1 20 - -
Pral5757g00002 179 ProSitePatterns Zinc finger C2H2 type domain signature. 28 48 IPR013087 -
Pral5757g00002 179 MobiDBLite consensus disorder prediction 49 69 - -
Pral5757g00002 179 MobiDBLite consensus disorder prediction 162 179 - -
Pral5757g00002 179 MobiDBLite consensus disorder prediction 156 179 - -
Pral5757g00002 179 PANTHER OS07G0101800 PROTEIN 3 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5757g00002 Pral-Chr5757 37315 37891 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5757g00002 24 57 C2H2 Transcription Factor Family AT3G09290 79.412 1.80e-15 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral5757g00002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5757g00002 - - lang:109360170 174.481