Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5756g00001 AACTTGTGTGTTTCTAGCGAAGCAAGTCTGGCTAATCCTTGGTGGACCGGTCAGGTGGGGTTGCCGGGAGTAGAGCCGGCAACCAACTCCCCCACCCTCAACAAGCGCCACACCGATCTTTCCATTAACGACAGCAGTGGCCGGAGCGGCAACCGAGAAGAAGATGAAGAAAGAGAAAACGGAGACGAACCCAAGGAGGGTGCAGTCGATGTCGGAACCCGCCGGCCCAGGGGCCGACCTCCCGGCTCCAAAAACAAACCCAAGCCACCCATCTTCGTCACCCGAGATAGTCCCAACGCCCTAAGAAGCCACGTGATGGAAGTTGCCGGTGGAACCGACGTTGCAGAGAGTGTGGCTCAATTCGCAAGGAGGCGTCAGCGTGGCGTTTGTGTTCTCAGTGGAAGCGGCTCCGTCGCCAACGTCACTCTCCGACAACCCGCTGCCCCTGGAGCTGTTGTGGCTCTCCATGGCAGGTTTGAAATTCTATCCCTAACAGGTGCGTTCTTGCCGGGACCGGCCCCTCCCGGCGCGACGGGGCTCACGGTGTATCTCGCAGGGGGACAAGGACAGGTCGTCGGTGGAAGTGTCGTCGGGTCTCTAGTAGCAGCTGGACCAGTGATGGTCATTGCTGCGACTTTTGCTAATGCGACTTACGAAAGACTACCACTTGATGACGATGATGAGGGAGCCAGTGCTGCGCCACAAGGAGGAGCAGGAGAAGGGTCACCACGGGGAATCGGTAGCAGCGGTGGCCAGTCTCTGCCACCCGGACTTCCGGATCCGTCGTCTCTGCCTTTGTACAACCTGCCGCCGAATCTGATGCCCAACGGTGGTGGAGGGCAGGTGGGGCATGAAGCTTTTGCTTGGGCTCACGGAAGGCAACCTTTCTGA 891 0.5915 NLCVSSEASLANPWWTGQVGLPGVEPATNSPTLNKRHTDLSINDSSGRSGNREEDEERENGDEPKEGAVDVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGTDVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDDDEGASAAPQGGAGEGSPRGIGSSGGQSLPPGLPDPSSLPLYNLPPNLMPNGGGGQVGHEAFAWAHGRQPF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5756g00001 296 PIRSF ESCAROLA 20 296 IPR014476 GO:0003680
Pral5756g00001 296 ProSiteProfiles PPC domain profile profile. 98 235 IPR005175 -
Pral5756g00001 296 FunFam AT-hook motif nuclear-localized protein 101 228 - -
Pral5756g00001 296 SUPERFAMILY AF0104/ALDC/Ptd012-like 98 226 - -
Pral5756g00001 296 Pfam Plants and Prokaryotes Conserved (PCC) domain 102 214 IPR005175 -
Pral5756g00001 296 MobiDBLite consensus disorder prediction 224 279 - -
Pral5756g00001 296 CDD DUF296 102 185 IPR005175 -
Pral5756g00001 296 MobiDBLite consensus disorder prediction 23 47 - -
Pral5756g00001 296 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 46 291 IPR014476 GO:0003680
Pral5756g00001 296 MobiDBLite consensus disorder prediction 14 99 - -
Pral5756g00001 296 Gene3D - 101 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5756g00001 Pral-Chr5756 14208 16880 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5756g00001 10 296 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 61.168 3.77e-105 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5756g00001 - - var:108341460 355.91