Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5751g00011 ATGGCGGAGCGAGGTTCGCATAGTGTGGGTCATCGATTAGATCTTCAGCAGTTACAATTTGAAGCCCAGCATCGGTGGCTGCGGCCTGCTGAAATATGTGAAATTCTCCGCAATTATCGAAAGTTTCAAATTACTTCAGAACCTCCAAACAGGCCTCCAAGCGGTTCTCTCTTCCTGTTTGATCGGAAGGTGTTGAGATATTTTAGAAAGGATGGACATAATTGGAGGAAGAAAAAAGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGGAGCATTGATGTGTTACATTGCTACTATGCCCATGGGGAAGAAAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAACCGGACATGATGCACATAGTTTTTGTCCACTACTTGGAAGTAAAGGGCAACAAAACAAATATTGTAGGAAATGCTGATAGTGATGAGGTTACGTCAGGAAATAGCAGATCTTCGTCTCAATCTTCTGGTTTTCCTATTCGTTATGGTAATATGCCTTCAAGAAGCACAGATGCCGCGAGTCCAACTAGTACTTTGACTTCTTTATGTGAAGATGCTGATTCAGGTGATCATGGACAGCCATCAGTTTCTGGAACAAATTACATCCCACTTGTCCAGGGAGATAAAACTGGAGGAAGCAATGCATCCTTCGTCGAGGGCCAAAATGTCCATGGCATGGCATCTTGGGACAATATCTTGGACCAATGTACTGCTGGCTTACCTGCTGATCCAAATCTTGCATCATTTGCTTCTGTCCCACCCTATTCAGTTGGGAACATTCTTGAACAAGAACCTGCTCTGGGTGATCTTTTAGAAACTAAGGGTAACTTAGCTGAGGCAGGGAAATCTCAGTCTTTTCAATCAAATTGGCAGATTCCTTTTGAAGACAATTCAGGACAGTTGCATAAATGGCCAATGACCCAATTGTTGAGTTCTGAATATGGATCTGATTTTGCCTCTGGTTTACTGGAGCATGAATCTCATAATGCGGGTCCTGAAATTGGTTCTGATCTATTAACTTTCAATGATCAGTCTAGAGAACAAGCTTGGCATGAAAACTTTTCAGAACAGCATACAGATGTACAATATCAATTTTCTTCGAAACCTAATTCTGAGAATGAGAATGCTTTCACAATGAAACGCCCATTATTAGACGGAGATGATAGCCTGAAGAAAGTTGACAGCTTTTCTCGATGGGTTAGTAAAGAACTTCCAGACGTGGATGATCTACGCATGCAATCCTCCTCTGGTATTTCATGGGGCACAGATGAAAGCGGGCAAGTTATAGATGATTCTTCATTGAGTCCCTCCCTCTCTCATGACCAGCTGTTCAGCATATATGATTTTTCACCTAAATGGGCTTATGCTGATTCTCAAACTGAGGTTTTGATCATTGGAACATTTTTGAAGAATCAACCAATGGTGGCAAACTGCAACTGGTCTTGTATGTTTGGGGAAGTTGAAGTTCCTGCTGAGATTTTAGCCAATGGAATTTTGTGTTGTCTTGCTCCGGGTCATAAGGCTGGAAGGTTCCCCTTCTATGTTACATGTTCTAATAGGTTAGCTTGCAGTGAAGTGAGGGAATTTGATTACAGAGAGGGCTTTGCTAAAGATGTCGAAGTTGAAGATGTTTACAGCAGTTCATGGGAAATGCTGTTTTATTTGCGATTGGAAGCTTTGCTTGCTTTAAAATCAGTGCATCCTTCAAATGACAAGTCATTTGATAGTGATGCAGAGAAAAGAAATTTGATTTATAAGCTTGTTTCATTGAAGGAAGAAGAGGCGTATTTAAATAAGGAAGAGACAACTTTAGATATGGACATGTCCCAGCAGAAGGTAAAGGAACAGCAATTCCAAAGACAAGTGAAAGAGAAGCTGTACTCATGGTTACTGCACAAAGTAGCTGAAGACGGTAAAGGGCCAAATGTATTAGACGAGGAGGGACAGGGTGTGCTGCATCTAACAGCTGCTCTTGGTTATGATTGGGCCATAGCACCAATTATTATTGCTGGAGTTAATATCAATTTCCGGGACATAAATGGATGGACGGCTCTGCATTGGGCTGCCTCTTGTGGCAGGGAGCGGACAGTTGCTCTCCTTGTTACCATGGGGGCAAACCCTGGAGCATTGACCGATCCATCTCCAGCATTTCCTTCGGGTAGAACACCTGCAGATCTTGCTTCTAGCAATGGACACAAAGGAATCTCAGGCTTTCTTGCAGAGTGTTCATTAACTGACCACCTTGCATCTCTCACAATGGATGACCAAAAGGGAGATGGTGGTCAAGAAGCTTCAGGAATGAAAGCTGTGCATACTGTTTCAGAACGTTCCGCAACGCCTTTGTTTTATGGTGATGATATGCCTGATGCCCTGTGCCTTAAGGATTCTCTCACTGCTGTTCGTAATGCTACACAAGCCGCTGATCGTATACATCAAGTATTTAGAATGCAGTCATTCCAAAGAAAGCAGTTAAATGAGTACGAGGATGATGAGCTTGGACTGTTGGATCCACGAACTCTTTCTCTTCTAGCTTCTAAGGCAGGCAAGGCTGGACAAGGAGATGGGTTAGCCAATGCTGCAGCAACACAAATACAGAAGAAGTTTCGTGGCTGGAAGAAGAGAAAAGAATTCCTAATAATTCGTCAAAGAATTGTTAAAATCCAGGCTCATGTAAGAGGGCACCAGGTAAGGAAGCAATACAAGTCCATCATCTGGTCTGTAGGAATCCTGGAGAAGGTCATATTGCGTTGGAGACGCAAGGGCAGTGGCTTACGTGGATTTCGACCTGATGCTGCTGCTAACAAGGAACCCAGCCAACCAAGTGAATCTTTGAAAGAGGATGACTATGACTTTCTCAAGGAAGGTAGGAAACAAAGTGAGGAAAGGTTCCAGAAAGCCCTTTTGAGGGTAAAGTCCATGGTTCAGTATCCTGAAGCACGGGCTCAATATCGACGGCTGCTGAATGTTGTTGAGGACTTCCGTCAGACCAAGGAGGGCAATATGGACATGACTAATTCAGAAGAGACGGTTGATGGTGTGGAGCAGCTGATTGATCTTGATATGCTTTTAGATGATAATTTCCTACCTATAGCATTTGACTGA 3123 0.4304 MAERGSHSVGHRLDLQQLQFEAQHRWLRPAEICEILRNYRKFQITSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLEVKGNKTNIVGNADSDEVTSGNSRSSSQSSGFPIRYGNMPSRSTDAASPTSTLTSLCEDADSGDHGQPSVSGTNYIPLVQGDKTGGSNASFVEGQNVHGMASWDNILDQCTAGLPADPNLASFASVPPYSVGNILEQEPALGDLLETKGNLAEAGKSQSFQSNWQIPFEDNSGQLHKWPMTQLLSSEYGSDFASGLLEHESHNAGPEIGSDLLTFNDQSREQAWHENFSEQHTDVQYQFSSKPNSENENAFTMKRPLLDGDDSLKKVDSFSRWVSKELPDVDDLRMQSSSGISWGTDESGQVIDDSSLSPSLSHDQLFSIYDFSPKWAYADSQTEVLIIGTFLKNQPMVANCNWSCMFGEVEVPAEILANGILCCLAPGHKAGRFPFYVTCSNRLACSEVREFDYREGFAKDVEVEDVYSSSWEMLFYLRLEALLALKSVHPSNDKSFDSDAEKRNLIYKLVSLKEEEAYLNKEETTLDMDMSQQKVKEQQFQRQVKEKLYSWLLHKVAEDGKGPNVLDEEGQGVLHLTAALGYDWAIAPIIIAGVNINFRDINGWTALHWAASCGRERTVALLVTMGANPGALTDPSPAFPSGRTPADLASSNGHKGISGFLAECSLTDHLASLTMDDQKGDGGQEASGMKAVHTVSERSATPLFYGDDMPDALCLKDSLTAVRNATQAADRIHQVFRMQSFQRKQLNEYEDDELGLLDPRTLSLLASKAGKAGQGDGLANAAATQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQYKSIIWSVGILEKVILRWRRKGSGLRGFRPDAAANKEPSQPSESLKEDDYDFLKEGRKQSEERFQKALLRVKSMVQYPEARAQYRRLLNVVEDFRQTKEGNMDMTNSEETVDGVEQLIDLDMLLDDNFLPIAFD 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5751g00011 1040 Pfam IPT/TIG domain 453 531 IPR002909 -
Pral5751g00011 1040 Gene3D - 864 911 - -
Pral5751g00011 1040 ProSiteProfiles IQ motif profile. 887 911 IPR000048 GO:0005515
Pral5751g00011 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 865 914 IPR027417 -
Pral5751g00011 1040 ProSiteProfiles IQ motif profile. 864 893 IPR000048 GO:0005515
Pral5751g00011 1040 Pfam Ankyrin repeats (3 copies) 659 748 IPR002110 GO:0005515
Pral5751g00011 1040 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1003 - -
Pral5751g00011 1040 Gene3D Immunoglobulins 446 541 IPR013783 -
Pral5751g00011 1040 SMART iq_5 863 885 IPR000048 GO:0005515
Pral5751g00011 1040 SMART iq_5 886 908 IPR000048 GO:0005515
Pral5751g00011 1040 FunFam Calmodulin-binding transcription activator 2 446 542 - -
Pral5751g00011 1040 MobiDBLite consensus disorder prediction 146 207 - -
Pral5751g00011 1040 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Pral5751g00011 1040 FunFam Calmodulin-binding transcription activator 2 863 911 - -
Pral5751g00011 1040 Pfam IQ calmodulin-binding motif 889 908 IPR000048 GO:0005515
Pral5751g00011 1040 Pfam IQ calmodulin-binding motif 866 884 IPR000048 GO:0005515
Pral5751g00011 1040 ProSiteProfiles Ankyrin repeat profile. 687 719 IPR002110 GO:0005515
Pral5751g00011 1040 SUPERFAMILY E set domains 453 539 IPR014756 -
Pral5751g00011 1040 SMART ANK_2a 726 755 IPR002110 GO:0005515
Pral5751g00011 1040 SMART ANK_2a 687 716 IPR002110 GO:0005515
Pral5751g00011 1040 Gene3D - 613 766 IPR036770 -
Pral5751g00011 1040 MobiDBLite consensus disorder prediction 933 953 - -
Pral5751g00011 1040 SUPERFAMILY Ankyrin repeat 643 749 IPR036770 -
Pral5751g00011 1040 SMART CG_1_2 18 136 IPR005559 GO:0003677
Pral5751g00011 1040 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Pral5751g00011 1040 ProSiteProfiles Ankyrin repeat region circular profile. 687 713 - -
Pral5751g00011 1040 MobiDBLite consensus disorder prediction 146 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5751g00011 Pral-Chr5751 97704 107655 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5751g00011 1 1022 CAMTA Transcription Factor Family AT5G64220 52.914 0.0 1030
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Pral5751g00011 CG-1 1.5e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5751g00011 K21596 - gmx:100795682 1469.91