Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5747g00006 ATGGAGGCTTCTGGGAGGATTTCCGAAGAGTGGAGTTCTCTTAGTGGATTGTACACAGCTGAGGAAGCTGATTTTATGAATCAACTGCTTGGTAACAACTGTTCAGTCCCGGAAGAGATACTATATGAAAATTCAACTTTGGGATTTCCATGTGCGTTTTGGCCTGGACATGAATCAACAGTTGTGAGCGTCACGGGCATCAATAACAACACTTCATATTTTCCTTCCAATGATGCTGATGCTAATGCTAATGCCAATTTCTTCAGTTTCTCACAAGGAAGTAGCTCCAGTACTGATATTGGTGTTAGATACCGCCCTAATGATCCATCCATCAATTTTGATTCTGTGTCCATGGGTTTTTCTTTGGGGGATGCCAAAATTTTCCCATACAGTGTTCAAAGCCATGACCATTTGAGCCATCAGATCAATGAAAATACTCATGAAGAGTCAGTTGTTGACCCAGTTAAGAGGGTTCTTGCGGTTGCTGACAAGAATTTTCAGGCTAATAGGGAATGTGAAGAACTAGTTTCTTCTGAACCAGCTGAAAAGGGTAAAAACACCAATCTAGAGAAGTCAGAGAAAAGATCTAGGAGCTCTTGGGAGGTACAGAAGAACAAGAGGAATGTTAAATCAAAGAAGAACACAAAATCTGAATGTATAAGCAAAAATGAAGAGGATAGGAGCTTGCAGAGGCAGAGCTCGAGCAGTGGCTGCTCAGAGGATGATTCCAATGCTTCTCAGGAGCTAAATGTGGGGTCCACTTCAAGTTTCAGTCCTAAAGATTCTGCATCTCTCAAGTCTAATGGCAAATCAATGCCTGCTAAAAGTCCTGCCGCTGATCCACAGAGCGTATATGCGAGAAGAAGAAGAGAAAGAATAAACGAAAGGTTGAGAATCCTACAAAACCTTGTCCCCAATGGAACTAAGGTGGATATAAGCACCATGCTTGAGGAAGCAGTTCAATATGTGAAGTTCTTACAGCTTCAAATAAAGCTTCTCAGCTCTGACGATCTGTGGATGTACGCTCCTATTGCTTACAATGGATTGAACATTGGCCTAGATCTTAACATCACACCTACCAAACAACCATAG 1092 0.4185 MEASGRISEEWSSLSGLYTAEEADFMNQLLGNNCSVPEEILYENSTLGFPCAFWPGHESTVVSVTGINNNTSYFPSNDADANANANFFSFSQGSSSSTDIGVRYRPNDPSINFDSVSMGFSLGDAKIFPYSVQSHDHLSHQINENTHEESVVDPVKRVLAVADKNFQANRECEELVSSEPAEKGKNTNLEKSEKRSRSSWEVQKNKRNVKSKKNTKSECISKNEEDRSLQRQSSSSGCSEDDSNASQELNVGSTSSFSPKDSASLKSNGKSMPAKSPAADPQSVYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGLNIGLDLNITPTKQP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5747g00006 363 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 134 335 IPR045843 GO:0003700|GO:0006355
Pral5747g00006 363 MobiDBLite consensus disorder prediction 173 286 - -
Pral5747g00006 363 SMART finulus 283 332 IPR011598 GO:0046983
Pral5747g00006 363 MobiDBLite consensus disorder prediction 173 229 - -
Pral5747g00006 363 MobiDBLite consensus disorder prediction 230 271 - -
Pral5747g00006 363 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 277 326 IPR011598 GO:0046983
Pral5747g00006 363 FunFam Basic helix-loop-helix transcription factor 278 335 - -
Pral5747g00006 363 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 281 342 IPR036638 GO:0046983
Pral5747g00006 363 Gene3D - 281 335 IPR036638 GO:0046983
Pral5747g00006 363 Pfam Helix-loop-helix DNA-binding domain 287 327 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5747g00006 Pral-Chr5747 73241 74775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5747g00006 1 353 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 40.000 7.70e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral5747g00006 HLH 8.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5747g00006 - - pcin:129292046 525.398