Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5747g00001 ATGAGTTGCAGCGGTTGTCGTGTTCTGCGAAAACGATGCAGCGACGAGTGCATGCTCCGGCATTGCTTTCAGGGGATCCAAGGCCCTCAAGCCCAAGCCCACGCCACCGTCTTCCTCGCCAAGTTCTTCGGCCGTGCCCGCCTCATGTCTTTCGTCTCCGCCGTTTCCTCCTCCCAAGACCCCGTCAATTTGTTTCAGTCGTTGTTGTTTGAAGCGCTGGGACGTACCCTAAACCCAGTGAATGGAGCAGTGGGGCTTCTCTGGTCCGGGAATTGGCATCTCTGCCAGCTGGCGGTGGAGACGGTGCTCCGTGGCGGCCCGTTGACCCCACTACTCCCTCCGGATTTCTCCATTTTTGTGGCTGCAGCGGAGGTTCAGTAG 381 0.5879 MSCSGCRVLRKRCSDECMLRHCFQGIQGPQAQAHATVFLAKFFGRARLMSFVSAVSSSQDPVNLFQSLLFEALGRTLNPVNGAVGLLWSGNWHLCQLAVETVLRGGPLTPLLPPDFSIFVAAAEVQ 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5747g00001 126 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 109 - -
Pral5747g00001 126 ProSiteProfiles LOB domain profile. 1 108 IPR004883 -
Pral5747g00001 126 Pfam Lateral organ boundaries (LOB) domain 2 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5747g00001 Pral-Chr5747 13189 13917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5747g00001 1 111 AS2 family AT3G49940 72.973 1.84e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral5747g00001 LOB 1.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5747g00001 - - zju:125424336 167.933