Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5745g00012 ATGAGTAAAAATATGGTTGATGCTTTGCATGAAGTGCATCACACAGGTGGTGATCTTGTTGTTAACCCTAAAAAGGATGTTCTGTTGTATGAAGGGGACAGAGATTTTGAGCCACACAAGGGCATTGAATTTGATTCTCATGAAGCAGCTTATTCATTTTATCAAGAATATGCCAAATCTATGGGATTCACCACTTCAATAAAAAACAGCAGGCGTTCAAAGAAAACCAAAGAATTTATTGATGCCAAATTCGCATGCTCTAGATATGGATTTACTCCCGAGTCAGATAGTGGGAGCAGTCGAAGGCCAAGTGTAAAGAAGACAGATTGCAAAGCCTGCATGCATGTGAAGAGAAGGGCAGATGGAAAGTGGATAATTCATGAATTCATAAAGGAGCATAATCATGAACTTCTACCAGCTTTGGCATATCATTTTCGGATTCATAGAAATGTGAAGTTAGCTGAAAAGAATAACATTGATATATTGCATGCTGTTAGTGAACGTACCAGAAAGATGTACGTTGAAATGTCTAAGCAATCTAGTGGCTGCCATAACTTTGGGTCTCATCTCAGTGATGTAAATTATCAGTTTGAAAGAGGCCAACATCTGGCTTTGGACGAGGGAGATGCTCGTGTTATTCTTGAGTATTTTAAGCACATTCAAAAGGAGAATCCTAACTTCTTTTATGCTATTGATTTGAATGAAGAACAACGCTTGAGAAATTTGTTTTGGGTTGATGCAAAAAGTAGGAGTGATTATGTCAGTTTTAATGATGTAGTTTCGTTTGATACTTCTTACATCAAAAGCAATGATAAGTTTCCATTTGCTCCTTTTGTTGGAGTGAACCATCACTTTCAGCCCATATTGCTTGGATGTGCATTGGTTGCTGATGAGACCAAACCAACATTTGTTTGGTTGATGAAGACATGGACTAGAGCAATGGGTGGGCAAGCTCCTAAAGTCATAATCACAGATCAAGACAAAGCCTTGAAGGCATCAGCTGAAGAAGTCTTCCCAAATGCACGCCATTGCTTTTCTCTTTGGCACGTACTTGATAGGATACCTGAAAATCTTTCTATGGTGATAAAAAGGTATAAGAATTTCTTGCCGAAGTTCAACAAATGCATATTTAAGTCTTGGACAGATGAAGAGTTTGACATGAGGTGGTGGAAAATGGTCACTAGATTTGAACTCCAGGATGACGTGTGGTTTCAGTCATTGTATGAAGACCGGAAAAAGTGGGTGCCTACTTATATGGGGGATACCTTTTTAGCTGGAATGTCTACTGCTCAACGCTCTGAAAGTATGAACTCTTTCTTTGACAAATACATTCATAAGAAAATTACTGTTAAAGAGTTTGTGAAACAGTATGGGACAATTCTTCAGAATAGGTATGAAGAGGAAGCTATTGCAGATTTTGATACATTGCACAAACAGCCAGCACTCAAGTCTCCTTCTCCTTGGGAAAAACAAATGTCAACTGTTTATACACATGCGATCTTCAAGAAATTCCAAGTTGAAGTCTTGGGTGTTGTTGGTTGTCATCCCAGGAGAGACGGTGGAGATGGAAGTATTGCAAAATTTGTAGTTCAAGATTGTGAGAAGGAGGAAGAGTTTTTGGTCACTTGGAACGAGATGAACTCAGAAGTTTCTTGCTTCTGTCGATTATTTGAATATAAAGGTTTCCTTTGCAGGCATGCGTTGAATGTTCTCCAGCTTTGTGGCTGTTCAAGTATTCCATCTCACTACATTTTAAAAAGGTGGACCAAAGATGCAAAAAGTAGGGTATCAATGGTAGATGGAACTGAAAGGATCCAAACTAGGGTGCAACGTTATAATGACTTGTGTAAAAAAGCTATTGAATTGAGTGAAGAAGGATCCTTATCTGAAGAGAGTTATGATGTTGTTTTCCGTGCACTTGTTGATGCCCTGAAAAATTGTGTGCATGTAAATAATTCTAACAACAATAATGCAGAAACCAGCAACAGTTCTCTTGCCCTGCGTGAAGCAGAAGAAAATCAGGTTAACATTGTGACAAAAACAACTAAAAAGAGGACACCAGCTAAGAGAAGAAAGGTACAAGTAGATACAGACATGATACTTGTCGAGGCACCAGACAGCCTGCAGCAAATGGATAACCTTAGCTCGGATGGAATGACCCTTAATGGATATTATGGTGCCCAGCAAAATGTCCAAGGACTGGTACAGTTGAACTTAATGGAGCCTCCTCATGATGGTTACTATGTCAATCAACAGAGTATGCAAGGCCTTGGTCAATTGAATTCTATGACCCCAGGCCACGATGGGTTTTTCGGGACACAGCAAAGCATTCATGGGCTGGGGCCATTGGAGTTTCGTCCACCAACCACTTTTGGATATACCCTGCAGGATGAGCCTGATCTGAGATCTGCTCAGTTTCATGGCAGCAGTTCAAGAAATACATAG 2445 0.3975 MSKNMVDALHEVHHTGGDLVVNPKKDVLLYEGDRDFEPHKGIEFDSHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGFTPESDSGSSRRPSVKKTDCKACMHVKRRADGKWIIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSKQSSGCHNFGSHLSDVNYQFERGQHLALDEGDARVILEYFKHIQKENPNFFYAIDLNEEQRLRNLFWVDAKSRSDYVSFNDVVSFDTSYIKSNDKFPFAPFVGVNHHFQPILLGCALVADETKPTFVWLMKTWTRAMGGQAPKVIITDQDKALKASAEEVFPNARHCFSLWHVLDRIPENLSMVIKRYKNFLPKFNKCIFKSWTDEEFDMRWWKMVTRFELQDDVWFQSLYEDRKKWVPTYMGDTFLAGMSTAQRSESMNSFFDKYIHKKITVKEFVKQYGTILQNRYEEEAIADFDTLHKQPALKSPSPWEKQMSTVYTHAIFKKFQVEVLGVVGCHPRRDGGDGSIAKFVVQDCEKEEEFLVTWNEMNSEVSCFCRLFEYKGFLCRHALNVLQLCGCSSIPSHYILKRWTKDAKSRVSMVDGTERIQTRVQRYNDLCKKAIELSEEGSLSEESYDVVFRALVDALKNCVHVNNSNNNNAETSNSSLALREAEENQVNIVTKTTKKRTPAKRRKVQVDTDMILVEAPDSLQQMDNLSSDGMTLNGYYGAQQNVQGLVQLNLMEPPHDGYYVNQQSMQGLGQLNSMTPGHDGFFGTQQSIHGLGPLEFRPPTTFGYTLQDEPDLRSAQFHGSSSRNT 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5745g00012 814 Pfam MULE transposase domain 259 351 IPR018289 -
Pral5745g00012 814 Pfam SWIM zinc finger 548 574 IPR007527 GO:0008270
Pral5745g00012 814 Pfam FAR1 DNA-binding domain 52 139 IPR004330 -
Pral5745g00012 814 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 648 IPR031052 GO:0006355
Pral5745g00012 814 SMART 26again6 550 577 IPR006564 GO:0008270
Pral5745g00012 814 ProSiteProfiles Zinc finger SWIM-type profile. 539 575 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5745g00012 Pral-Chr5745 101410 106035 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral5745g00012 MULE 6.9e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5745g00012 - - gmx:100805377 1368.99