Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5745g00009 ATGACGAGTGCTTCGGAGCTATTCTACAATCGGAGGTATCGTTTGGGACGAGCCTCTGATTATCTTGGGAACGATTCGTTGCCCGATAGATACCTTCACTTCGATGTTAATAACCGTCGCCATCATCACCATCCACACGATTTCAGTGATGGTGAGACTCTCCGACGGTCCACGCCAACGCAGCGGCTATTCCATCGTTTGTCCTCCACGGAGCGGGAATCAGCTAGACTTGACCGGTGGCATAACCGATCTCTTTCAAACACGAGCAATTCTGCTGAAAATGTTAGCAGTTTCAGGGGCCCTAGAGTGACTGGCAATGACAGGCTACCCGTAGCTGTGGTACATGCAAGGGCAAGACTCCTTCAGAGGCTGAGTGCAGCACCTCCGTCCAGAAACAGGCAAAGAGGTAGAGCCTCTCTAGATATTGACGACATGAGGCATACTAACTTCAGGGATGAAGAGAGCAGTGAATCATCAACAACTGGTTTAGCTGAGGGTTTCTCATTAACTGACTTAACTTTACAAATGGAAAGGTCCCAACTCTCACATGAAGTGAACAAAAAACCACCAGGACTCAACCAGGAGGCCATAGACCGTTTGCATATGGAAGTATTTGGCAACAGGGAAACACAAACGGAAGAACTGGAATCTATAGTACTGCAGGATTGTGGCATATGCCTAGAAACTTTTCTGGATGGAGACAAGCTGATACGCTTGCCATGTGGGCACAGATTCCACTCTGTCTGTTTGGATCCATGGGTTCGAAAATGTGGCGATTGCCCGTTCTGTAGAAGAGAGATATTTGTAAACTAG 813 0.4772 MTSASELFYNRRYRLGRASDYLGNDSLPDRYLHFDVNNRRHHHHPHDFSDGETLRRSTPTQRLFHRLSSTERESARLDRWHNRSLSNTSNSAENVSSFRGPRVTGNDRLPVAVVHARARLLQRLSAAPPSRNRQRGRASLDIDDMRHTNFRDEESSESSTTGLAEGFSLTDLTLQMERSQLSHEVNKKPPGLNQEAIDRLHMEVFGNRETQTEELESIVLQDCGICLETFLDGDKLIRLPCGHRFHSVCLDPWVRKCGDCPFCRREIFVN 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5745g00009 270 ProSiteProfiles Zinc finger RING-type profile. 223 264 IPR001841 -
Pral5745g00009 270 SMART FANCL_C_2 219 269 - -
Pral5745g00009 270 SMART ring_2 223 263 IPR001841 -
Pral5745g00009 270 SUPERFAMILY RING/U-box 222 269 - -
Pral5745g00009 270 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 177 268 IPR013083 -
Pral5745g00009 270 PANTHER SI:CH211-59O9.10 66 268 - -
Pral5745g00009 270 MobiDBLite consensus disorder prediction 124 162 - -
Pral5745g00009 270 CDD RING-H2_PA-TM-RING 222 264 - -
Pral5745g00009 270 MobiDBLite consensus disorder prediction 136 154 - -
Pral5745g00009 270 Pfam Ring finger domain 222 264 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5745g00009 Pral-Chr5745 86164 88825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5745g00009 1 267 C3H Transcription Factor Family AT1G49850 38.148 1.77e-38 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5745g00009 - - pcin:129293386 492.656