Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5745g00009 | ATGACGAGTGCTTCGGAGCTATTCTACAATCGGAGGTATCGTTTGGGACGAGCCTCTGATTATCTTGGGAACGATTCGTTGCCCGATAGATACCTTCACTTCGATGTTAATAACCGTCGCCATCATCACCATCCACACGATTTCAGTGATGGTGAGACTCTCCGACGGTCCACGCCAACGCAGCGGCTATTCCATCGTTTGTCCTCCACGGAGCGGGAATCAGCTAGACTTGACCGGTGGCATAACCGATCTCTTTCAAACACGAGCAATTCTGCTGAAAATGTTAGCAGTTTCAGGGGCCCTAGAGTGACTGGCAATGACAGGCTACCCGTAGCTGTGGTACATGCAAGGGCAAGACTCCTTCAGAGGCTGAGTGCAGCACCTCCGTCCAGAAACAGGCAAAGAGGTAGAGCCTCTCTAGATATTGACGACATGAGGCATACTAACTTCAGGGATGAAGAGAGCAGTGAATCATCAACAACTGGTTTAGCTGAGGGTTTCTCATTAACTGACTTAACTTTACAAATGGAAAGGTCCCAACTCTCACATGAAGTGAACAAAAAACCACCAGGACTCAACCAGGAGGCCATAGACCGTTTGCATATGGAAGTATTTGGCAACAGGGAAACACAAACGGAAGAACTGGAATCTATAGTACTGCAGGATTGTGGCATATGCCTAGAAACTTTTCTGGATGGAGACAAGCTGATACGCTTGCCATGTGGGCACAGATTCCACTCTGTCTGTTTGGATCCATGGGTTCGAAAATGTGGCGATTGCCCGTTCTGTAGAAGAGAGATATTTGTAAACTAG | 813 | 0.4772 | MTSASELFYNRRYRLGRASDYLGNDSLPDRYLHFDVNNRRHHHHPHDFSDGETLRRSTPTQRLFHRLSSTERESARLDRWHNRSLSNTSNSAENVSSFRGPRVTGNDRLPVAVVHARARLLQRLSAAPPSRNRQRGRASLDIDDMRHTNFRDEESSESSTTGLAEGFSLTDLTLQMERSQLSHEVNKKPPGLNQEAIDRLHMEVFGNRETQTEELESIVLQDCGICLETFLDGDKLIRLPCGHRFHSVCLDPWVRKCGDCPFCRREIFVN | 270 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5745g00009 | 270 | ProSiteProfiles | Zinc finger RING-type profile. | 223 | 264 | IPR001841 | - | |
Pral5745g00009 | 270 | SMART | FANCL_C_2 | 219 | 269 | - | - | |
Pral5745g00009 | 270 | SMART | ring_2 | 223 | 263 | IPR001841 | - | |
Pral5745g00009 | 270 | SUPERFAMILY | RING/U-box | 222 | 269 | - | - | |
Pral5745g00009 | 270 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 177 | 268 | IPR013083 | - | |
Pral5745g00009 | 270 | PANTHER | SI:CH211-59O9.10 | 66 | 268 | - | - | |
Pral5745g00009 | 270 | MobiDBLite | consensus disorder prediction | 124 | 162 | - | - | |
Pral5745g00009 | 270 | CDD | RING-H2_PA-TM-RING | 222 | 264 | - | - | |
Pral5745g00009 | 270 | MobiDBLite | consensus disorder prediction | 136 | 154 | - | - | |
Pral5745g00009 | 270 | Pfam | Ring finger domain | 222 | 264 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5745g00009 | Pral-Chr5745 | 86164 | 88825 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5745g00009 | 1 | 267 | C3H Transcription Factor Family | AT1G49850 | 38.148 | 1.77e-38 | 133 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5745g00009 | - | - | pcin:129293386 | 492.656 |