Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00072 ATGATAAAAGATGAAATCAAGTCTGCTAAAGAAGAGATGGGTGGGGTCAAAGAAGAAAATGAAGAACGGTTGGACATGATGCTGGACCAAGTGGGAAAGGATTACCAGTCCCTCCAAATGCGTTTCTTTGACATCTTGCGCAGAGAAGCTTCTGAAAAAGGCAAAGCAGATTCAGCTGATTCCCATGATGAAACTGAAGAGCCTGAGCTCGTGTCACTTTGCCTGGGAAGAGGTCCAAGGGACCCCAAAAAAGATACAAGAATCGGAAACACTACTAAACCTAAAGAAAGTGAAGATTTGGCGGCTCGCCTTACCCTCAGATTAGACTGCAATTGTGAAACGTCAACGGAAATGGTGTCTGATCAGAGCCCAGGAAACAGCTCAGGAGAAACAAAGGAAGCAGAAATGGGGGGAACATGGCAATCAAATAAATCTGTCAAGGCCAAAAGTGGAGAAGATGAAATTTCAGAGCAGATACCAGCTAAGAGAGCGAGGGTTTCTGTGAGAGCAAGATGTGACACCCCCACGATGAGTGATGGATGCCAGTGGAGAAAATATGGACAGAAGCTAGCCAAAGGGAATCCTTGTCCACGTGCATACTATCGCTGCACGGTTGCACCAGCATGTCCAGTCAGAAAGCAGGTGCAAAGATGTGCTGAGGACATGTCCATCTTAATCACTACATATGAAGGGACCCACAACCACCCACTTTCAGTTTCAGCCACAGCCATGGCTTCCACCACTTCAGCTGCTGCTTCCATGCTATTGTCAGGTTCCTCAACATCTCAGCCTGCAGATAACAGTTTTGCATCATTTACAAATGCTCCCACACTCCTTAATGGCCTAAACGTTGGACATTTTGATCCATCAAAAGCAAAACAGGTCTTCTTGCCCAACCCTGCCCCACCTTTGTTCCCCACAATCACTCTAGACTTAACTTCTGCTTCCTCCTCATCAACCCATGTCAATAATCGTCCCCCTTCAAACTTTGCTTTAAACCCAAGATTTCCTCCAACAAGTCTAAGTTTTTGCTCAAAGGAGCCAAACATTCAACAAGCAGCATTGGGTAGTGGAATCCTTCATCATGCGAAAACCCACGTGAGGTCAGTTGACCTGTTAAATCAATTTCATGAACAGTTCCATCAAAACTGCATGCAAAACCAAGCTCCTTCACGAGAGGCTTTAGCAGAAACCTTAACCAAAGCAATCAGTACGGATCCAAGACTTCGATCAGTAATAGCTGCAGCAGTTTCATCCATAATGGGTCAAGGATCCACCAGTGTGAATCAGCCAGGGGAAGGGGAAATTTCAGGGTTAGGGTTGAACTTGAAACTAGGAGAACATTCTCGGTTTGCTTCTTCCAATCCGTTGACCCAAAATGGGAAAGGATGCTTGCCAGGTTACTTCAACAGACTGTCATCAAATTCCTATGTTGAAAACTTCTTGCCTCTCCAACCTCCAGTTCCATTTTCTGTCTCTAAGAGAAGCGTGCCTCCTGCCATTAGTGATCAGGTCAATCGTTAA 1524 0.4541 MIKDEIKSAKEEMGGVKEENEERLDMMLDQVGKDYQSLQMRFFDILRREASEKGKADSADSHDETEEPELVSLCLGRGPRDPKKDTRIGNTTKPKESEDLAARLTLRLDCNCETSTEMVSDQSPGNSSGETKEAEMGGTWQSNKSVKAKSGEDEISEQIPAKRARVSVRARCDTPTMSDGCQWRKYGQKLAKGNPCPRAYYRCTVAPACPVRKQVQRCAEDMSILITTYEGTHNHPLSVSATAMASTTSAAASMLLSGSSTSQPADNSFASFTNAPTLLNGLNVGHFDPSKAKQVFLPNPAPPLFPTITLDLTSASSSSTHVNNRPPSNFALNPRFPPTSLSFCSKEPNIQQAALGSGILHHAKTHVRSVDLLNQFHEQFHQNCMQNQAPSREALAETLTKAISTDPRLRSVIAAAVSSIMGQGSTSVNQPGEGEISGLGLNLKLGEHSRFASSNPLTQNGKGCLPGYFNRLSSNSYVENFLPLQPPVPFSVSKRSVPPAISDQVNR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00072 507 Gene3D WRKY domain 162 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5741g00072 507 Pfam WRKY DNA -binding domain 179 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5741g00072 507 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 5 427 IPR044810 GO:0003700
Pral5741g00072 507 MobiDBLite consensus disorder prediction 78 100 - -
Pral5741g00072 507 MobiDBLite consensus disorder prediction 115 157 - -
Pral5741g00072 507 FunFam probable WRKY transcription factor 31 162 239 - -
Pral5741g00072 507 MobiDBLite consensus disorder prediction 51 100 - -
Pral5741g00072 507 MobiDBLite consensus disorder prediction 1 21 - -
Pral5741g00072 507 SMART WRKY_cls 177 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5741g00072 507 MobiDBLite consensus disorder prediction 51 70 - -
Pral5741g00072 507 SUPERFAMILY WRKY DNA-binding domain 170 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5741g00072 507 ProSiteProfiles WRKY domain profile. 172 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5741g00072 507 MobiDBLite consensus disorder prediction 115 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5741g00072 Pral-Chr5741 356895 359320 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00072 13 472 WRKY Transcription Factor Family AT5G15130 41.532 3.52e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5741g00072 WRKY 4.2e-24 CL0274