Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00071 ATGTCAGTGGAGACCACGGCAAACATGTGTGGTCCTCGTAGTCTAGAGACTGGCGAGAAGAAAACAATTTCCATTTGCCTCGAAGAAGATCGCTGTGTTCAAGAGAAAGATGAAATCAAGTCTGCTAAAGAAGAGATGGGTGGGGTCAAAGAAGAAAATGAAGAACGGTTGGACATGATGCTGGACCAAGTGGGAAAGGATTACCAGTCCCTCCAAATGCGTTTCTTTGACATCTTGCGCAGAGAAGCTTCTGAAAAAGGCAAAGCAGATTCAGCTGATTCCCATGATGAAACTGAAGAGCCTGAGCTCGTGTCACTTTGCCTGGGAAGAGGTCCAAGGGACCCCAAAAAAGATACAAGAATCGGAAACACTACTAAACCTAAAGAAAGTGAAGATTTGGCGGCTCGCCTTACCCTCAGATTAGACTGCAATTGTGAAACGTCAACGGAAATGGTGTCTGATCAGAGCCCAGGAAACAGCTCAGGAGAAACAAAGGAAGCAGAAATGGGGGGAACATGGCAATCAAATAAATCTGTCAAGGCCAAAAGTGGAGAAGATGAAATTTCAGAGCAGATACCAGCTAAGAGAGCGAGGGTTTCTGTGAGAGCAAGATGTGACACCCCCACGATGAGTGATGGATGCCAGTGGAGAAAATATGGACAGAAGCTAGCCAAAGGGAATCCTTGTCCACGTGCATACTATCGCTGCACGGTTGCACCAGCATGTCCAGTCAGAAAGCAGGTGCAAAGATGTGCTGAGGACATGTCCATCTTAATCACTACATATGAAGGGACCCACAACCACCCACTTTCAGTTTCAGCCACAGCCATGGCTTCCACCACTTCAGCTGCTGCTTCCATGCTATTGTCAGGTTCCTCAACATCTCAGCCTGCAGATAACAGTTTTGCATCATTTACAAATGCTCCCACACTCCTTAATGGCCTAAACGTTGGACATTTTGATCCATCAAAAGCAAAACAGGTCTTCTTGCCCAACCCTGCCCCACCTTTGTTCCCCACAATCACTCTAGACTTAACTTCTGCTTCCTCCTCATCAACCCATGTCAATAATCGTCCCCCTTCAAACTTTGCTTTAAACCCAAGATTTCCTCCAACAAGTCTAAGTTTTTGCTCAAAGGAGCCAAACATTCAACAAGCAGCATTGGGTAGTGGAATCCTTCATCATGCGAAAACCCACGTGAGGTCAGTTGACCTGTTAAATCAATTTCATGAACAGTTCCATCAAAACTGCATGCAAAACCAAGCTCCTTCACGAGAGGCTTTAGCAGAAACCTTAACCAAAGCAATCAGTACGGATCCAAGACTTCGATCAGTAATAGCTGCAGCAGTTTCATCCATAATGGGTCAAGGATCCACCAGTGTGAATCAGCCAGGGGAAGGGGAAATTTCAGGGTTAGGGTTGAACTTGAAACTAGGAGAACATTCTCGGTTTGCTTCTTCCAATCCGTTGACCCAAAATGGGAAAGGATGCTTGCCAGGTTACTTCAACAGACTGTCATCAAATTCCTATGTTGAAAACTTCTTGCCTCTCCAACCTCCAGTTCCATTTTCTGTCTCTAAGAGAAGCGTGCCTCCTGCCATTAGTGATCAGGTCAATCGTTAA 1623 0.4566 MSVETTANMCGPRSLETGEKKTISICLEEDRCVQEKDEIKSAKEEMGGVKEENEERLDMMLDQVGKDYQSLQMRFFDILRREASEKGKADSADSHDETEEPELVSLCLGRGPRDPKKDTRIGNTTKPKESEDLAARLTLRLDCNCETSTEMVSDQSPGNSSGETKEAEMGGTWQSNKSVKAKSGEDEISEQIPAKRARVSVRARCDTPTMSDGCQWRKYGQKLAKGNPCPRAYYRCTVAPACPVRKQVQRCAEDMSILITTYEGTHNHPLSVSATAMASTTSAAASMLLSGSSTSQPADNSFASFTNAPTLLNGLNVGHFDPSKAKQVFLPNPAPPLFPTITLDLTSASSSSTHVNNRPPSNFALNPRFPPTSLSFCSKEPNIQQAALGSGILHHAKTHVRSVDLLNQFHEQFHQNCMQNQAPSREALAETLTKAISTDPRLRSVIAAAVSSIMGQGSTSVNQPGEGEISGLGLNLKLGEHSRFASSNPLTQNGKGCLPGYFNRLSSNSYVENFLPLQPPVPFSVSKRSVPPAISDQVNR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00071 540 SMART WRKY_cls 210 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5741g00071 540 MobiDBLite consensus disorder prediction 86 103 - -
Pral5741g00071 540 MobiDBLite consensus disorder prediction 148 190 - -
Pral5741g00071 540 FunFam probable WRKY transcription factor 31 195 272 - -
Pral5741g00071 540 SUPERFAMILY WRKY DNA-binding domain 203 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5741g00071 540 Coils Coil 32 52 - -
Pral5741g00071 540 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 34 460 IPR044810 GO:0003700
Pral5741g00071 540 MobiDBLite consensus disorder prediction 111 133 - -
Pral5741g00071 540 Gene3D WRKY domain 195 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5741g00071 540 ProSiteProfiles WRKY domain profile. 205 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5741g00071 540 MobiDBLite consensus disorder prediction 148 179 - -
Pral5741g00071 540 MobiDBLite consensus disorder prediction 86 133 - -
Pral5741g00071 540 Pfam WRKY DNA -binding domain 212 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5741g00071 Pral-Chr5741 356895 359679 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00071 46 505 WRKY Transcription Factor Family AT5G15130 41.532 6.64e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5741g00071 WRKY 4.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5741g00071 - - lang:109353541 565.459