Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00068 ATGGGTTACCTGAGTAGAGCTTCGAAGAGGCTAGGACAAGCTAGGTACTTGTCCCTGTGGTTTAATTCCTCACCATTGTCGACCATTTATGGAGGCAAATCATTGGACTTAGAAAGTAGACTAATCTGTCGTCGCCTTGCTCTGAGCCGCGCATTGTTCTGTTCTCAACCGCGCCAAAACAGCAAAGAAAACAGTCGCATAGATTTGACTCAATACCCCCCAGAGCTAATTAGGAACTTCTCTATAATTGCACATATAGATCATGGCAAGTCCACTCTTGCTGATCGGCTGCTCGAGCTTACAGGGACTATCAAGAAGGGACATGGTCAGCCTCAGTATCTTGACAAGTTGCAGGTAGAAAGAGAAAGGGGTATCACAGTTAAAGCCCAGACAGCAACAATGTTCTACAAGCACAGCACTCAGGAAGCCACATGTAGTGACGACCAAGGTCCAGCTAACTTTCTGCTAAATCTTATTGATACTCCCGGGCACGTAGACTTCAGTTATGAAGTGTCGAGGTCACTGGCTGCTTGTCAGGGTGTTCTTTTAGTTGTTGATGCTGCTCAAGGAGTGCAAGCGCAAACTGTTGCTAATTTTTATCTTGCTTTTGAATCCAACCTAACAATTATTCCTGTCATAAACAAAATAGATCAGCCGACTGCTGATCCTGATGGTGTTAAAGCGCAACTAAAATCAATGTTTGATCTTGACCCGAGTGACGCACTTTTAACATCTGCTAAAACAGGACAGGGTCTTGAGCAAGTCCTTCCTGCTGTCATAGAGCGCATGCCTCCACCTCCTGGGAAGAGTGGTTCTCCCCTGCGCATGCTTTTGCTCGATTCTTATTATGATGAATACAAAGGGGTAATATGCCATGTTGCCGTTGTTGATGGTGCCCTGCGCAAGGGGGATAAAATTTCATCTGCTGCAACTGGACAGGCTTATGAAGCTTTGGATGTAGGCATCATGCATCCTGAACTCAAATCTACTGGAATCCTGCTTACTGGACAAGTTGGTTATGTTGTTAGTGGCATGCGTTCAACCAAAGATGCGCGCGTTGGAGATACACTTTTCCATACTCGAAGCACCATAGAGCCTCTTCCAGGCTTTAAGCCAGCAAAACATATGGTATTCTCTGGTCTTTATCCGGCGGATGGATCTGATTTTGAAGCCCTCAATCATGCAATAGAGAGACTAACATGTAACGATGCTAGCGTCTCTATTACCAAAGAAAGTAGCACAGCCCTAGGCTTGCTACACATGGATGTTTTTCATCAGCGGCTTGAACAGGAGTACGGAGCTCATGTTATCTCAACCGTTCCAACTGTACCATATATATTTGAGTATTCGGATGGAAGCAAATTGCAAGTTGAGAATCCTGCTGCGTTACCCTCTAATCCCAAGCAACGAGTGACAGCATGCTGGGAACCAACAGTGATAGCTACAATTATTATTCCTAGTCAGTATGTGGGGTCTGTTATTACCCTTTGCTCTGAGAGAAGAGGCCAGCAATTGGAGTACTCATTCATTGACAGTCAAAGGGCATTCATGAAGTATCGCTTGCCTTTGAGGGAAATTGTTGTTGACTTTTACAATGAATTAAAAAGTCTAACATCAGGCTATGCTTCATTTGATTATGAGGATGCGGATTATCAGCAATCTGATTTGGTGAAACTTGACATTCTCTTGAATGGACAACCCGTTGATGCAATGGCAACCATTGTTCATAAGTTGAAAGCATATAGAGTAGGGCGTGAACTGGTGGAGAAGTTGAAGAAAGTTATAGACAGACAAATGTTTGAGATAACCATACAAGCTGCTATTGGGTCAAAAGTTATAGCAAGGGAGACGATTTCAGCAATGAGGAAAAATGTCCTTGCCAAATGTTATGGCGGTGATGTTACTCGGAAAAGGAAGCTATTGGAGAAACAAAAAGAAGGAAAGAAGAGAATGAAACGAGTTGGTTCTGTTGATATACCGCAAGAGGCATTCCATGAATTATTGAAAGTTTCATAA 2016 0.4345 MGYLSRASKRLGQARYLSLWFNSSPLSTIYGGKSLDLESRLICRRLALSRALFCSQPRQNSKENSRIDLTQYPPELIRNFSIIAHIDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHSTQEATCSDDQGPANFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFESNLTIIPVINKIDQPTADPDGVKAQLKSMFDLDPSDALLTSAKTGQGLEQVLPAVIERMPPPPGKSGSPLRMLLLDSYYDEYKGVICHVAVVDGALRKGDKISSAATGQAYEALDVGIMHPELKSTGILLTGQVGYVVSGMRSTKDARVGDTLFHTRSTIEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSITKESSTALGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKLQVENPAALPSNPKQRVTACWEPTVIATIIIPSQYVGSVITLCSERRGQQLEYSFIDSQRAFMKYRLPLREIVVDFYNELKSLTSGYASFDYEDADYQQSDLVKLDILLNGQPVDAMATIVHKLKAYRVGRELVEKLKKVIDRQMFEITIQAAIGSKVIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS 671
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00068 671 NCBIfam small GTP-binding protein domain 80 255 IPR005225 GO:0005525
Pral5741g00068 671 PRINTS GTP-binding elongation factor signature 157 167 IPR000795 GO:0003924|GO:0005525
Pral5741g00068 671 PRINTS GTP-binding elongation factor signature 209 218 IPR000795 GO:0003924|GO:0005525
Pral5741g00068 671 PRINTS GTP-binding elongation factor signature 79 92 IPR000795 GO:0003924|GO:0005525
Pral5741g00068 671 PRINTS GTP-binding elongation factor signature 122 130 IPR000795 GO:0003924|GO:0005525
Pral5741g00068 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 304 IPR027417 -
Pral5741g00068 671 CDD LepA 78 262 - -
Pral5741g00068 671 Pfam GTP-binding protein LepA C-terminus 563 669 IPR013842 -
Pral5741g00068 671 Gene3D - 555 629 IPR038363 -
Pral5741g00068 671 SUPERFAMILY EF-G C-terminal domain-like 376 444 IPR035647 -
Pral5741g00068 671 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 75 267 IPR000795 GO:0003924|GO:0005525
Pral5741g00068 671 FunFam Translation factor GUF1, mitochondrial 269 367 - -
Pral5741g00068 671 Hamap Elongation factor 4 [lepA]. 70 671 IPR006297 GO:0005525
Pral5741g00068 671 FunFam Elongation factor 4 74 268 - -
Pral5741g00068 671 NCBIfam translation elongation factor 4 76 670 IPR006297 GO:0005525
Pral5741g00068 671 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 115 130 IPR031157 -
Pral5741g00068 671 SUPERFAMILY EF-G C-terminal domain-like 475 569 IPR035647 -
Pral5741g00068 671 CDD EF4_II 274 359 - -
Pral5741g00068 671 Gene3D Elongation Factor G (Translational Gtpase), domain 3 368 440 - -
Pral5741g00068 671 Pfam Elongation factor G C-terminus 476 561 IPR000640 -
Pral5741g00068 671 Gene3D - 441 554 - -
Pral5741g00068 671 FunFam Translation factor GUF1, mitochondrial 441 553 - -
Pral5741g00068 671 Gene3D Translation factors 270 367 - -
Pral5741g00068 671 Gene3D - 75 268 IPR027417 -
Pral5741g00068 671 CDD lepA_C 476 555 IPR035654 -
Pral5741g00068 671 FunFam Translation factor GUF1, mitochondrial 555 629 - -
Pral5741g00068 671 Pfam Elongation factor Tu GTP binding domain 77 264 IPR000795 GO:0003924|GO:0005525
Pral5741g00068 671 PANTHER TRANSLATION FACTOR GUF1-RELATED 51 670 IPR006297 GO:0005525
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral5741g00068 Pral-Chr5741 351194 356272 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00068 77 218 Eukaryotic Initiation Factors Gene Family AT1G56070 39.583 5.81e-23 102
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5741g00068 K21594 - gmx:100781092 1126.69