Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00065 ATGGGTTACCTGAGTAGAGCTTCGAAGAGGCTAGGACAAGCTAGGTACTTGTCCCTGTGGTTTAATTCCTCACCATTGTCGACCATTTATGGAGGCAAATCATTGGACTTAGAAAGTAGACTAATCTGTCGTCGCCTTGCTCTGAGCCGCGCATTGTTCTGTTCTCAACCGCGCCAAAACAGCAAAGAAAACAGTCGCATAGATTTGACTCAATACCCCCCAGAGCTAATTAGGAACTTCTCTATAATTGCACATATAGATCATGGCAAGTCCACTCTTGCTGATCGGCTGCTCGAGCTTACAGGGACTATCAAGAAGGGACATGGTCAGCCTCAGTATCTTGACAAGTTGCAGGTAGAAAGAGAAAGGGGTATCACAGTTAAAGCCCAGACAGCAACAATGTTCTACAAGCACAGCACTCAGGAAGCCACATGTAGTGACGACCAAGGTCCAGCTAACTTTCTGCTAAATCTTATTGATACTCCCGGGCACGTAGACTTCAGTTATGAAGTGTCGAGGTCACTGGCTGCTTGTCAGGGTGTTCTTTTAGTTGTTGATGCTGCTCAAGGAGTGCAAGCGCAAACTGTTGCTAATTTTTATCTTGCTTTTGAATCCAACCTAACAATTATTCCTGTCATAAACAAAATAGATCAGCCGACTGCTGATCCTGATGGTGTTAAAGCGCAACTAAAATCAATGTTTGATCTTGACCCGAGTGACGCACTTTTAACATCTGCTAAAACAGGACAGGGTCTTGAGCAAGTCCTTCCTGCTGTCATAGAGCGCATGCCTCCACCTCCTGGGAAGAGTGGTTCTCCCCTGCGCATGCTTTTGCTCGATTCTTATTATGATGAATACAAAGGGGTAATATGCCATGTTGCCGTTGTTGATGGTGCCCTGCGCAAGGGGGATAAAATTTCATCTGCTGCAACTGGACAGGCTTATGAAGCTTTGGATGTAGGCATCATGCATCCTGAACTCAAATCTACTGGAATCCTGCTTACTGGACAAGTTGGTTATGTTGTTAGTGGCATGCGTTCAACCAAAGATGCGCGCGTTGGAGATACACTTTTCCATACTCGAAGCACCATAGAGCCTCTTCCAGGCTTTAAGCCAGCAAAACATATGGTATTCTCTGGTCTTTATCCGGCGGATGGATCTGATTTTGAAGCCCTCAATCATGCAATAGAGAGACTAACATGTAACGATGCTAGCGTCTCTATTACCAAAGAAAGTAGCACAGCCCTAGGTCTGGGATTCAGCAGGTGTGGTTTCTTAGGCTTGCTACACATGGATGTTTTTCATCAGCGGCTTGAACAGGAGTACGGAGCTCATGTTATCTCAACCGTTCCAACTGTACCATATATATTTGAGTATTCGGATGGAAGCAAATTGCAAGTTGAGAATCCTGCTGCGTTACCCTCTAATCCCAAGCAACGAGTGACAGCATGCTGGGAACCAACAGTGATAGCTACAATTATTATTCCTAGTCAGTATGTGGGGTCTGTTATTACCCTTTGCTCTGAGAGAAGAGGCCAGCAATTGGAGTACTCATTCATTGACAGTCAAAGGGCATTCATGAAGTATCGCTTGCCTTTGAGGGAAATTGTTGTTGACTTTTACAATGAATTAAAAAGTCTAACATCAGGCTATGCTTCATTTGATTATGAGGATGCGGATTATCAGCAATCTGATTTGGTGAAACTTGACATTCTCTTGAATGGACAACCCGTTGATGCAATGGCAACCATTGTTCATAAGTTGAAAGCATATAGAGTAGGGCGTGAACTGGTGGAGAAGTTGAAGAAAGTTATAGACAGACAAATGTTTGAGATAACCATACAAGCTGCTATTGGGTCAAAAGTTATAGCAAGGGAGACGATTTCAGCAATGAGGAAAAATGTCCTTGCCAAATGTTATGGCGGTGATGTTACTCGGAAAAGGAAGCTATTGGAGAAACAAAAAGAAGGAAAGAAGAGAATGAAACGAGTTGGTTCTGTTGATATACCGCAAGAGGCATTCCATGAATTATTGAAAGTTTCATAA 2046 0.4355 MGYLSRASKRLGQARYLSLWFNSSPLSTIYGGKSLDLESRLICRRLALSRALFCSQPRQNSKENSRIDLTQYPPELIRNFSIIAHIDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHSTQEATCSDDQGPANFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFESNLTIIPVINKIDQPTADPDGVKAQLKSMFDLDPSDALLTSAKTGQGLEQVLPAVIERMPPPPGKSGSPLRMLLLDSYYDEYKGVICHVAVVDGALRKGDKISSAATGQAYEALDVGIMHPELKSTGILLTGQVGYVVSGMRSTKDARVGDTLFHTRSTIEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSITKESSTALGLGFSRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKLQVENPAALPSNPKQRVTACWEPTVIATIIIPSQYVGSVITLCSERRGQQLEYSFIDSQRAFMKYRLPLREIVVDFYNELKSLTSGYASFDYEDADYQQSDLVKLDILLNGQPVDAMATIVHKLKAYRVGRELVEKLKKVIDRQMFEITIQAAIGSKVIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00065 681 SUPERFAMILY EF-G C-terminal domain-like 376 454 IPR035647 -
Pral5741g00065 681 NCBIfam translation elongation factor 4 76 680 IPR006297 GO:0005525
Pral5741g00065 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 304 IPR027417 -
Pral5741g00065 681 SUPERFAMILY EF-G C-terminal domain-like 485 579 IPR035647 -
Pral5741g00065 681 Pfam GTP-binding protein LepA C-terminus 573 679 IPR013842 -
Pral5741g00065 681 Gene3D Elongation Factor G (Translational Gtpase), domain 3 368 450 - -
Pral5741g00065 681 FunFam Translation factor GUF1, mitochondrial 269 367 - -
Pral5741g00065 681 CDD LepA 78 262 - -
Pral5741g00065 681 Hamap Elongation factor 4 [lepA]. 70 681 IPR006297 GO:0005525
Pral5741g00065 681 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 75 267 IPR000795 GO:0003924|GO:0005525
Pral5741g00065 681 Gene3D - 75 268 IPR027417 -
Pral5741g00065 681 FunFam Translation factor GUF1, mitochondrial 565 639 - -
Pral5741g00065 681 FunFam Translation factor GUF1, mitochondrial 451 563 - -
Pral5741g00065 681 FunFam Elongation factor 4 74 268 - -
Pral5741g00065 681 CDD EF4_III 375 451 - -
Pral5741g00065 681 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 115 130 IPR031157 -
Pral5741g00065 681 CDD lepA_C 486 565 IPR035654 -
Pral5741g00065 681 CDD EF4_II 274 359 - -
Pral5741g00065 681 Gene3D - 451 564 - -
Pral5741g00065 681 FunFam Translation factor GUF1, mitochondrial 368 450 - -
Pral5741g00065 681 NCBIfam small GTP-binding protein domain 80 255 IPR005225 GO:0005525
Pral5741g00065 681 Gene3D - 565 639 IPR038363 -
Pral5741g00065 681 Pfam Elongation factor G C-terminus 486 571 IPR000640 -
Pral5741g00065 681 Gene3D Translation factors 270 367 - -
Pral5741g00065 681 PRINTS GTP-binding elongation factor signature 79 92 IPR000795 GO:0003924|GO:0005525
Pral5741g00065 681 PRINTS GTP-binding elongation factor signature 209 218 IPR000795 GO:0003924|GO:0005525
Pral5741g00065 681 PRINTS GTP-binding elongation factor signature 157 167 IPR000795 GO:0003924|GO:0005525
Pral5741g00065 681 PRINTS GTP-binding elongation factor signature 122 130 IPR000795 GO:0003924|GO:0005525
Pral5741g00065 681 PANTHER TRANSLATION FACTOR GUF1-RELATED 51 680 IPR006297 GO:0005525
Pral5741g00065 681 Pfam Elongation factor Tu GTP binding domain 77 264 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5741g00065 Pral-Chr5741 351194 356272 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00065 77 218 Eukaryotic Initiation Factors Gene Family AT1G56070 39.583 6.21e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5741g00065 K21594 - gmx:100781092 1149.81