Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00060 ATGGCCTTCCCTCCTTCTCATACTTTCATGTTTCACACCAATCACTGCCATGAAGATCATCATCACGACCCCCACCTCTCCTCATCACCATCTCTCAAATCCTTCCCTCCATTACCACCCCAACACTACCAAACTCGGAGTGCACCTTTCATGGTGAAGAGATCGATGTCGTTTTCAGGGATAGAGAGCAAGTGCGATATGGAAGTGAACGGAGCTGATGATGATTTGTCGGATGACGGATCGGTGCAGATAGGGGAGAAGAAGAAGAGGCTGAACATGGAGCAGGTCAAGGCACTTGAGAAGAGCTTTGAAGTTGGGAACAAGCTTGAGCCAGAGAGGAAACTGGAGCTGGCTAAGGCTTTGGGTCTGCAGCCACGTCAGATCGCCATTTGGTTTCAGAACAGGAGAGCTCGATGGAAGACCAAGAACCTCGAGAAAGAATATGAATCCCTCAAGAAACAGTTCGAAGCTCTCAAAGCCGACAATAATGCTCTTAACCTTCAGAACCAGAAACTTCATGCAGAGCTGCAAGCTCTGAAAGGAAGAGATCACTGTGAAGGCGGAACAGTGAGCCTGGTGAAGAAAGAAACCGAGGGTTCTTGGAGCAATAATGGAAGTGACAACTGCTCAGACATCAATTTGGAGCTTTCAAGAACGCCAGTTAGAAACAGTCCTGTTTGTTCTCAGAACGGTAAAAGCCAGCTCGTAGGCTCTAATCTGAAGCCCACCAGCATAACACAACTCCTCCAGTTCTCAACAAGATCAGACCTCCAAGACGAAACCTTCTCCAACATGTTCAGCACCAACACTATCGATGATCAGCAGCAGAACCTCTGGACCTGGCCTCAAGAGCAGCACCATTATCATTGA 870 0.4805 MAFPPSHTFMFHTNHCHEDHHHDPHLSSSPSLKSFPPLPPQHYQTRSAPFMVKRSMSFSGIESKCDMEVNGADDDLSDDGSVQIGEKKKRLNMEQVKALEKSFEVGNKLEPERKLELAKALGLQPRQIAIWFQNRRARWKTKNLEKEYESLKKQFEALKADNNALNLQNQKLHAELQALKGRDHCEGGTVSLVKKETEGSWSNNGSDNCSDINLELSRTPVRNSPVCSQNGKSQLVGSNLKPTSITQLLQFSTRSDLQDETFSNMFSTNTIDDQQQNLWTWPQEQHHYH 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00060 289 ProSiteProfiles 'Homeobox' domain profile. 82 142 IPR001356 GO:0003677
Pral5741g00060 289 FunFam Homeobox-leucine zipper protein ATHB-13 78 146 - -
Pral5741g00060 289 ProSitePatterns 'Homeobox' domain signature. 117 140 IPR017970 GO:0000981|GO:0006355
Pral5741g00060 289 Coils Coil 134 182 - -
Pral5741g00060 289 Pfam Homeodomain 87 140 IPR001356 GO:0003677
Pral5741g00060 289 CDD homeodomain 87 143 IPR001356 GO:0003677
Pral5741g00060 289 SUPERFAMILY Homeodomain-like 78 144 IPR009057 -
Pral5741g00060 289 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 62 265 IPR045224 GO:0003700
Pral5741g00060 289 PRINTS Lambda-repressor HTH signature 122 138 IPR000047 GO:0003677
Pral5741g00060 289 PRINTS Lambda-repressor HTH signature 113 122 IPR000047 GO:0003677
Pral5741g00060 289 MobiDBLite consensus disorder prediction 19 47 - -
Pral5741g00060 289 Gene3D - 81 151 - -
Pral5741g00060 289 SMART HOX_1 85 146 IPR001356 GO:0003677
Pral5741g00060 289 Pfam Homeobox associated leucine zipper 142 181 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5741g00060 Pral-Chr5741 328021 330225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00060 1 282 Homeobox Transcription Factor Family AT5G15150 46.885 4.01e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pral5741g00060 Homeodomain 9.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5741g00060 K09338 - gmx:100790803 347.821