Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00051 ATGGAGGGGAAGAACGAAATAGACATTTTTGACGATATTCTGCTGCCTGGTTTCCGGTTTCATCCGACAGACGAGGAGCTTGTTGACTTCTACCTCAAGAATAAGATAGAGCAGAAGACTCTTCCTATTGACATCATTAAGCAAGTGGATATTTACAAGTACGATCCATGGGATCTTCCAAAGATGGCGAGCAGTACTGGTGAAAAAGAGTTGTACTTCTACTGTCAAAGAGACCGAAAATACAGAAACAGTGCTCGCCCAAATCGTGTGACCAGAGCTGGCTTCTGGAAGGCCACTGGAACTGATCGGCCTATATACTCCTCAAAGGGAAGGTGCATCGGTTTAAAGAAGTCGCTTGTGTTCTACAGAGGCAGAGCGGCCAGAGGCATCAAAACTGAATGGATGATGCATGAGTTTCGCCTTCCTTCTCTTTCTGTTTCTCCTCTTCCCACAAACCTCCCTCCAACTGACTCATGGGCAATCTGCAGGATATTCAAGAAAACCAACACTCACAAACCTTCATCTCAATCTCCCCCCTGGATCCCCAGCTTGCCGGCAGGTGATATCCTCACTCATGGTGGTGGTGCCACCACCTCCGGCAATCATTTCAGTGCAGAAAATCTGTCTTTCACGAAAGAAAATATCTCCGGCGCATATTTCTCAGCTTCAGATGTTCCCTCCTACAAACCCATCGACGCCCGAGTAGGAGATATTGATGGCGGCTTCAATTTCTCCACGCTGGAAGCGTCAGGACCCATGCTTTTGAACCCAGACTGCGAAGGATTTGAAGGGACAAACCAGCAGTTTAGTGGCTTATTATCAACGAGCGTACCTCAGGATATGCAAGGGAATATAAACAGAGCAACAGGGTTTTCTTTCACTAGGCCCGCTTCTCCTCTGCTATGGGACACCCCCTTGTTCAACTGA 927 0.4757 MEGKNEIDIFDDILLPGFRFHPTDEELVDFYLKNKIEQKTLPIDIIKQVDIYKYDPWDLPKMASSTGEKELYFYCQRDRKYRNSARPNRVTRAGFWKATGTDRPIYSSKGRCIGLKKSLVFYRGRAARGIKTEWMMHEFRLPSLSVSPLPTNLPPTDSWAICRIFKKTNTHKPSSQSPPWIPSLPAGDILTHGGGATTSGNHFSAENLSFTKENISGAYFSASDVPSYKPIDARVGDIDGGFNFSTLEASGPMLLNPDCEGFEGTNQQFSGLLSTSVPQDMQGNINRATGFSFTRPASPLLWDTPLFN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00051 308 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Pral5741g00051 308 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 201 - -
Pral5741g00051 308 SUPERFAMILY NAC domain 14 167 IPR036093 GO:0003677|GO:0006355
Pral5741g00051 308 Gene3D NAC domain 23 172 IPR036093 GO:0003677|GO:0006355
Pral5741g00051 308 FunFam NAC domain-containing protein 35 23 170 - -
Pral5741g00051 308 ProSiteProfiles NAC domain profile. 14 167 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5741g00051 Pral-Chr5741 259746 261496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00051 2 197 NAC Transcription Factor Family AT5G39820 61.290 2.86e-89 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5741g00051 NAM 1.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5741g00051 - - qsa:O6P43_004491 348.206