Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00043 ATGGAAGATTACATCACTATCCGTCCTGAAAAGCTTCTGACCAACCCAACCGATCTGGCATCTCGTTCGTCTGGCCCAAGCCACATTGCGATTCTGATGGATGAGATAATGAGTGCAGCCATGGAGGCTGATGGGTCCAAGAGCTCTGCCGCCGCAGGCAATGATAAGGACAAGGTCCAGAAACCGCAGGAAGGAGGAGGCGGCGGCGGGCCAAGAGCGGAATGTCGTTTCTGTCACGACGAGGACTGCGTCTCCAGATTTGATACGCCTTGCCGTTGCAGTGGCACTTTGAAGTATGCTCACAGGAGTTGCATCCAGAAATGGTGCAATATCAAAGGGGACACCATTTGTGAGATCTGCCGCCAGCCCTACGGTCCAGGTTATGCTGTGACGCATCGGAGCTCTTCCAATAACGACGAGGATGATGAGAGGGAAGGGTGGAGAATTCCGAGCACTAATGCACAGATTTATTCCCCGCTAACGCTGGCGGAAATGGCGACTGATCGCATGGCGGCAGCTCTGAATGAAGACTGTGACTTCAGACATCCCACTGGAGGTGTTTTGTGCGGAACCGGCGTCCTCATCATTTTTATCGTGATGATTCTGAGGGACGTTTATTACTACAGGCCACCTCAGCAGCAGGACAAAATGTTCAATTACTTCATGTTTGTGAGTGTGGATGACAGACAATTCCATTACTGTGGAGATACTTCCGAGAAAGGAACCGATCATAGTGACTTGTGCTCCAGGGAAGGGTCTGATTCTGCAACAAAATCAGGATCTGGGGACGAGTTGCAGATCAGAAATCATCCTTAA 816 0.5074 MEDYITIRPEKLLTNPTDLASRSSGPSHIAILMDEIMSAAMEADGSKSSAAAGNDKDKVQKPQEGGGGGGPRAECRFCHDEDCVSRFDTPCRCSGTLKYAHRSCIQKWCNIKGDTICEICRQPYGPGYAVTHRSSSNNDEDDEREGWRIPSTNAQIYSPLTLAEMATDRMAAALNEDCDFRHPTGGVLCGTGVLIIFIVMILRDVYYYRPPQQQDKMFNYFMFVSVDDRQFHYCGDTSEKGTDHSDLCSREGSDSATKSGSGDELQIRNHP 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00043 271 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 28 222 IPR033275 -
Pral5741g00043 271 SUPERFAMILY RING/U-box 73 124 - -
Pral5741g00043 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 132 IPR013083 -
Pral5741g00043 271 Pfam RING-variant domain 75 120 IPR011016 GO:0008270
Pral5741g00043 271 CDD RING_CH-C4HC3_MARCH 75 121 - -
Pral5741g00043 271 SMART ringv_2 74 121 IPR011016 GO:0008270
Pral5741g00043 271 ProSiteProfiles Zinc finger RING-CH-type profile. 67 127 IPR011016 GO:0008270
Pral5741g00043 271 MobiDBLite consensus disorder prediction 43 71 - -
Pral5741g00043 271 MobiDBLite consensus disorder prediction 238 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5741g00043 Pral-Chr5741 201195 203409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00043 66 124 C3H Transcription Factor Family AT2G22120 40.323 5.20e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5741g00043 - - aprc:113862531 162.54