Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00041 ATGACAAGGTTTCGGTTTCATTACAAATCGGAACTAGAATTGGGCTGGGCAGACCAAGCATCATGCCCAGCTCAAATAATGGACGGTCAGCATAAGATAAGCATTTCTACTGGCTATGTGAAGCCTGATGAGAGGACAAGTCAAAACATGCGCAGCATGAATACTGAAACAGATCAGCCGGAAAACCCTGCCGCCCAGAAGCAATATACTGGTCGTTCCATTGCAAAACTTCCAGAGAATTACCCTCCTGGTTTTCTTAGGAAGATAATGGCAGAGATAATAGGGACATATCTGTTGGTGTTTGTGGCAAGTGGGACGGCTGCACAGAGTGCTTTTGATGAGCAGAAAGTATCAAAACTAGGAGCTTCACTTGCAGGAGGATTCATAGTGATGGTGATGATTTATGCCATCGGGCACATCTCGGGGGCCCATATAAACCCAGCTGTCTCCTTAGCTTTCGCCGCCTCGGGCCATTTTCCATGGAAACAGGTCCCATTTTACGTGGGAGCTCAAATGACAGGAGGCATTTCTGCTTCTTTTACGCTACGGCTATTATTGGATCCTATGAAAAAGCTTGGAACAACCTCACCTTCTGGAACAGATGCTCAAGCTCTAGCTATGGAGATCGTGGCAACTTTCACTCTCATGTTCGTTATCTGCGCCGTCACAACTGATGCAAAAGCTGTGGGAGAGCTGGCAGGAGTTGCAGTGGGCTTTTCAGTGTGCATAGCAGGCATACTTGCAGGCCCAATATCGGGGGGATCGATGAATCCAGCAAGAACATTGGGTCCTGCAATAGCAAGTGGATCCTATAAAGGAATTTGGGTCTATCTGGTTGGACCAGTCGTTGGGGCCCTCTTAGGGGCATGGTCTTACAGTACTATTCAGGAGAATGATAATAACTCGGTGAGGGGAACTGAGCATGTTGGTATGAAAGACGATCCAAATGTTGTGCGTGCGAACAGTGTCTAA 972 0.4733 MTRFRFHYKSELELGWADQASCPAQIMDGQHKISISTGYVKPDERTSQNMRSMNTETDQPENPAAQKQYTGRSIAKLPENYPPGFLRKIMAEIIGTYLLVFVASGTAAQSAFDEQKVSKLGASLAGGFIVMVMIYAIGHISGAHINPAVSLAFAASGHFPWKQVPFYVGAQMTGGISASFTLRLLLDPMKKLGTTSPSGTDAQALAMEIVATFTLMFVICAVTTDAKAVGELAGVAVGFSVCIAGILAGPISGGSMNPARTLGPAIASGSYKGIWVYLVGPVVGALLGAWSYSTIQENDNNSVRGTEHVGMKDDPNVVRANSV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00041 323 PRINTS Major intrinsic protein family signature 207 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5741g00041 323 PRINTS Major intrinsic protein family signature 238 260 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5741g00041 323 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5741g00041 323 PRINTS Major intrinsic protein family signature 163 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5741g00041 323 PRINTS Major intrinsic protein family signature 126 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5741g00041 323 PRINTS Major intrinsic protein family signature 275 295 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5741g00041 323 MobiDBLite consensus disorder prediction 303 323 - -
Pral5741g00041 323 Pfam Major intrinsic protein 85 292 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5741g00041 323 PANTHER AQUAPORIN NIP2-1 62 299 IPR034294 -
Pral5741g00041 323 ProSitePatterns MIP family signature. 144 152 IPR022357 -
Pral5741g00041 323 MobiDBLite consensus disorder prediction 40 68 - -
Pral5741g00041 323 NCBIfam MIP family channel protein 91 292 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5741g00041 323 CDD MIP 87 292 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral5741g00041 323 MobiDBLite consensus disorder prediction 38 68 - -
Pral5741g00041 323 SUPERFAMILY Aquaporin-like 81 299 IPR023271 -
Pral5741g00041 323 Gene3D Glycerol uptake facilitator protein. 43 307 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5741g00041 Pral-Chr5741 187554 190621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00041 87 300 Major Intrinsic Protein MIP AT5G37820 50.926 8.04e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5741g00041 K09874 - qsa:O6P43_009088 342.428