Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00036 ATGTCTTCAGAACCCGGCTCGTCGGCATCGTCGTCTTCCCCAACCGCCGATGAATTGGACGACCACCAGATTCGAAGGCTTACTCTGCTGCTTCCTTTCATTTTCAGGGTAGCTGCTCCCCGTCAAAACCACCACGACAATGATTCCATCCTCGATCTTCCCCTCGGGGTCATCCTCTTTAACCCTGCCACCAGAACCACCGTCATGATCGACCGCTCCCTGGACTTGGACTCGCTGATCGAGGAGGTCCCCACCAAGCCCGGGCTGTTGCCCGCGTCCAAGGATTCCATGGCGGCCATGCCCACCGTCGCGGTCACTGAAGAAGATTCTGAGTGTGCGATTTGCTTGGAAGATTACGTCACCGGGGAAGAGGCTAGGGAGATGCCCTGCAAGCACAGGTTTCACCCTCGCTGCATCGAAAAGTGGTTGGGGATTCACGGCGTGTGTCCTGTTTGCCGATTCCCGATGCCCGTGGACGATAGGGACGCCGAGCTCCACAGCGGCGAGACGACGGAGAGTGATGGCGACCTCATGCATGCGGGTTCCAACCATTCCCGGAGCTCCGCGCATTCTGATCCTGCTTCTGATTCACAGATACGAGAGTCCCAGAGGGGATGA 618 0.5809 MSSEPGSSASSSSPTADELDDHQIRRLTLLLPFIFRVAAPRQNHHDNDSILDLPLGVILFNPATRTTVMIDRSLDLDSLIEEVPTKPGLLPASKDSMAAMPTVAVTEEDSECAICLEDYVTGEEAREMPCKHRFHPRCIEKWLGIHGVCPVCRFPMPVDDRDAELHSGETTESDGDLMHAGSNHSRSSAHSDPASDSQIRESQRG 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00036 205 MobiDBLite consensus disorder prediction 176 196 - -
Pral5741g00036 205 FunFam E3 ubiquitin-protein ligase RNF181 80 159 - -
Pral5741g00036 205 SMART ring_2 112 152 IPR001841 -
Pral5741g00036 205 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 46 157 - -
Pral5741g00036 205 ProSiteProfiles Zinc finger RING-type profile. 112 153 IPR001841 -
Pral5741g00036 205 SUPERFAMILY RING/U-box 106 159 - -
Pral5741g00036 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 159 IPR013083 -
Pral5741g00036 205 Pfam Ring finger domain 111 153 IPR001841 -
Pral5741g00036 205 MobiDBLite consensus disorder prediction 163 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5741g00036 Pral-Chr5741 167050 167667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00036 25 159 C3H Transcription Factor Family AT1G26800 43.066 2.81e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5741g00036 - - pcin:129305525 249.98