Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00034 ATGTCGGAAGCAAAAGACCCGGCGATCAAGCTCTTCGGGAAGACGATCCCACTGCCGGAGATTCCGGCCGGATCCAGAGGCTCGTCGGGAGCTCCAGCTTCTTCTTCTGGGGATGTTATTGATGATGGTATTGATCACAATCTTGTTTCTCCGACCACCTCATCGCGAGAGTCCAACACGAAGAGAGACGAAGAAGAGCAAGAGACCGAGAAGGACGCTTCGGGAGAGAATCCAAAAGAGAATACGGAGGATGGAGCCCCCGCTCAATCTACAAAAGAGGTCGCTAACCCGGATGCAGCCTCTAGGACAGGTGAAGAATCTATCACGCCCCCTACTGAGAAGGACGCTACTACATTGAAGGCTTCAAAATCTGAGGAAGAGCAAAGTGAGACAAGTAATTCACAAGAGAAGACTTTGAAAAAGCCAGACAAAATACTGCCTTGTCCCCGCTGCAAGAGCATGGACACCAAGTTCTGCTACTACAACAATTACAATGTCAACCAACCTCGCCACTTTTGCAAGAACTGCCAGAGATACTGGACTGCTGGTGGAACTATGAGGAATGTGCCTGTGGGTGCTGGTCGTCGAAAGAACAAGAACTCTTCTCACTATCGCCAAATAACTGTTGCTGAAGCACTCCAGACTGGTCGAGCAGACATGCCAAACGGGGTACATCATCCTGCCTTGAAACCCAATGGCGCAGTCCTTGCTTTTGGGACAGATACACCTTTGTGTGAGTCAATGGCATCTGTTTTGAACCTTGCTGATAAAACAATGCAGGATTGCTCGAGAAATGGATTTCATAGACCTGAAGAACTAAGAATTCCTGTTCCCTATGCCAATGGAGAGAAAGGAGATGATCATTCTAATAAATCTCCTGTGATGTCAACAAAGCCAATGGATGATACAAGCATCAACAGGCAACAAGAACAAGCAATGCAGAACTGTCAGAGTTTCCCACTTCAAGTTCCTTACTATCCTGGGGCACCTTGGCCTTTCCCATGGAATCCAGTGCAGTGGAGCTCTCCGGTTCCACCACCTGCGTTTTGCCCTCCAGGATTTACCATGCCATTCTATCCTGCAGCTGCATATTGGGGGTGTACTGTCTCAGGTGCTTGGAACATACCATGGCTACCACAACCATCATCACCAAACAGCGTGGGCCCTAATTCTGGACCTAACTCGCCAACGCTGGGTAAACATTCAAGAGAAGAAAACATGCTCAAGATCAATGACTCTCGGGGAGAGGATGAACGTGGTAAAGAAAACGGCAAAGAGAAGTGCCTTTGGGTTCCGAAAACTTTGAGGATTGATGACCCGGGAGAAGCAGCTAAAAGCTCTATATGGACAACGCTGGGGATTAAGAATGATATGGCTGAGTCAGTTCAAGAGGGAGGGCTCTTCAGGGCATTCCCATCAAAGGGTGACGGAAAAGATCATTCAACACAAAACTCAACAGTTTTACAGGCCAATCCAGCGGCATTGTCTAGGTCACTCAACTTTCATGAGGCCTCATAA 1518 0.4816 MSEAKDPAIKLFGKTIPLPEIPAGSRGSSGAPASSSGDVIDDGIDHNLVSPTTSSRESNTKRDEEEQETEKDASGENPKENTEDGAPAQSTKEVANPDAASRTGEESITPPTEKDATTLKASKSEEEQSETSNSQEKTLKKPDKILPCPRCKSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSHYRQITVAEALQTGRADMPNGVHHPALKPNGAVLAFGTDTPLCESMASVLNLADKTMQDCSRNGFHRPEELRIPVPYANGEKGDDHSNKSPVMSTKPMDDTSINRQQEQAMQNCQSFPLQVPYYPGAPWPFPWNPVQWSSPVPPPAFCPPGFTMPFYPAAAYWGCTVSGAWNIPWLPQPSSPNSVGPNSGPNSPTLGKHSREENMLKINDSRGEDERGKENGKEKCLWVPKTLRIDDPGEAAKSSIWTTLGIKNDMAESVQEGGLFRAFPSKGDGKDHSTQNSTVLQANPAALSRSLNFHEAS 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00034 505 ProSiteProfiles Zinc finger Dof-type profile. 146 200 IPR003851 GO:0003677|GO:0006355
Pral5741g00034 505 MobiDBLite consensus disorder prediction 83 117 - -
Pral5741g00034 505 MobiDBLite consensus disorder prediction 383 401 - -
Pral5741g00034 505 ProSitePatterns Zinc finger Dof-type signature. 148 184 IPR003851 GO:0003677|GO:0006355
Pral5741g00034 505 PANTHER CYCLIC DOF FACTOR 2 1 504 IPR045174 GO:0003700|GO:0006355
Pral5741g00034 505 MobiDBLite consensus disorder prediction 468 505 - -
Pral5741g00034 505 MobiDBLite consensus disorder prediction 1 146 - -
Pral5741g00034 505 MobiDBLite consensus disorder prediction 383 405 - -
Pral5741g00034 505 Pfam Dof domain, zinc finger 143 200 IPR003851 GO:0003677|GO:0006355
Pral5741g00034 505 MobiDBLite consensus disorder prediction 118 146 - -
Pral5741g00034 505 MobiDBLite consensus disorder prediction 57 79 - -
Pral5741g00034 505 MobiDBLite consensus disorder prediction 477 505 - -
Pral5741g00034 505 MobiDBLite consensus disorder prediction 277 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5741g00034 Pral-Chr5741 152343 156067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00034 6 505 C2C2-Dof Transcription Factor Family AT5G39660 45.333 1.63e-116 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral5741g00034 zf-Dof 4.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5741g00034 - - gmx:100784308 733.021