Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00024 ATGGGTCGGTCACCATGCTGCGACAAGGTGGGCTTAAAGAAAGGACCATGGACTCCTGAGGAAGATCAGAAGCTGTTAGCTTATATCGAAGAACACGGCCATGGAAGCTGGCGTGCCTTGCCAGCAAAAGCTGGACTTCAGAGGTGTGGCAAGAGCTGCAGACTGAGATGGACCAACTATCTTAGGCCGGATATAAAGAGAGGAAAGTTCAGCTTGCAAGAAGAGCAAACCATCATTCAACTCCATGCCCTCTTAGGGAACAGGTGGTCGGCTATCGCAACACACTTGCCAAAGAGAACAGATAATGAGATCAAGAACTACTGGAATACGCATCTTAAGAAAAGGCTAGCCAAAATGGGAATTGACCCGGTGACCCACAAGCCCAAGAATGATGCCCTTCTCTCCATCGACGGCCAATCCAAGAGTGCTGCCAACCTTAGTCACATGGCTCAATGGGAGAGTGCTAGGCTTGAAGCTGAAGCAAGGTTGGTTAGAGAATCGAAACTACGTTCGCATTCACTGCAGCATCAGCTTTGTAGCTCTGGGTTTTCGTCTTCATCTTCTGCTTCAACTTCAGCCCCAGTTGCGAATAAACCAGAGGGACCACCTATTTCCTCACGCTCTCTAGATGTGCTTAAGGCTTGGAATAATGGAGGTTGGTTGAAATCTACTGAAGGCCATAATGTTGGTGGCGACCTTGAATCCCCTTCGTCTTCCCTGACTTTCTCAGAGAACGCTCCACCAATTATGACCAGCGGACTTGGAGAAAGTACAATGCCTATGATTGAGTTTGTGGGCTCGTCAGGTTCTTCCGAGACAGGAATTGTGAAAGAGGAAGGTGAGCAAGAGTGGAAAGGTTACGAAATCTCAGTGCATCTGCCAGAATACAAAGATGGTATGGATAACCCCATGTCTTTTGCGTCTAGCCTGCATGAGTTCACAATGTCCATGGAAGGCACGTGGACGTCTGAGTCTCTCAGGGCTAGTACTGATGCTATCGCTGAGGAAGGATTCACCAATCTTTTGCTTAATACTAACTCCGATGACCGGAGTTTGTCGGAGGAGGGCGGAGGAGATTCTAATAACTGTGACGGTAACAGAGGCAGTACTGGTCGGAGTGACCTCTATGAAGATAACAAGAACTACTGGAACAGCATTCTTAATTTAGTCAACTCCTCCCCTTCTGACTCTCCCATGTTCTGA 1203 0.4805 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDALLSIDGQSKSAANLSHMAQWESARLEAEARLVRESKLRSHSLQHQLCSSGFSSSSSASTSAPVANKPEGPPISSRSLDVLKAWNNGGWLKSTEGHNVGGDLESPSSSLTFSENAPPIMTSGLGESTMPMIEFVGSSGSSETGIVKEEGEQEWKGYEISVHLPEYKDGMDNPMSFASSLHEFTMSMEGTWTSESLRASTDAIAEEGFTNLLLNTNSDDRSLSEEGGGDSNNCDGNRGSTGRSDLYEDNKNYWNSILNLVNSSPSDSPMF 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00024 400 CDD SANT 69 112 IPR001005 -
Pral5741g00024 400 Gene3D - 13 66 - -
Pral5741g00024 400 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pral5741g00024 400 CDD SANT 16 61 IPR001005 -
Pral5741g00024 400 MobiDBLite consensus disorder prediction 180 195 - -
Pral5741g00024 400 FunFam MYB-related transcription factor 13 66 - -
Pral5741g00024 400 MobiDBLite consensus disorder prediction 345 372 - -
Pral5741g00024 400 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pral5741g00024 400 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pral5741g00024 400 SMART sant 66 114 IPR001005 -
Pral5741g00024 400 SMART sant 13 63 IPR001005 -
Pral5741g00024 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pral5741g00024 400 MobiDBLite consensus disorder prediction 345 369 - -
Pral5741g00024 400 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pral5741g00024 400 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 192 - -
Pral5741g00024 400 Gene3D - 69 116 - -
Pral5741g00024 400 FunFam MYB transcription factor 69 116 - -
Pral5741g00024 400 MobiDBLite consensus disorder prediction 180 207 - -
Pral5741g00024 400 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pral5741g00024 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5741g00024 Pral-Chr5741 115969 118631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00024 1 400 MYB Transcription Factor Family AT3G01140 53.155 5.26e-126 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5741g00024 Myb_DNA-binding 1.5e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5741g00024 K09422 - qsa:O6P43_009101 602.438