Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00021 ATGGCACCTTATTCCTCAGAGATCAGATGCAGAAAAAGCTGTAGGCTGAGGTGGTTAAACTATCTGAAACCGGACATCAAGTGGGGAGACTTCTCTGAGGATGAAATTGATATGATGATCAGGCTTCACAGACTCCTGGGAAACAGATGGTCACTGATAGCTGGAAGGCTTCCTGGAAGAACACCAAACGGTGTGAAAAACTACTGGAACACCCATATGAGTGAGAAGGGACGAGTTATTTCATCTCAGGGGAGAGAGGTGGAAGAAAAAGCACAGGAAACAACCATGAGAAGCCGTACACCAACAGCAATAAAACCTCAAGGTTTCAGGTTATCGCCATCAAGAAGCTCATCGTCTTGGTGGAGAAATAAGAATCCAGATGGTGGTGAAGTTAGCGAAGACAAAAGTGCAAGCAGTAGTAGTGGGCCAGATGAAGAGCAAAACCAGAAGCAGGTAGATGAGGAGTCGGTGGAGTGGTGGAAATGCTTGCTTCTTGATGATAACGACATTGAGAACGAAGGTCAAGAGAAAATTGGCTCATCATTATCAACATCATCATCAACGTCATCCACGGAGCAAGATGGCAAGTCTGATCAATTCTGGGACCAGCAACTTACTTGGACTGATGACTTTCCTCTAATCACCACTCTCCCGGATTTTCTAGCCTAA 669 0.4529 MAPYSSEIRCRKSCRLRWLNYLKPDIKWGDFSEDEIDMMIRLHRLLGNRWSLIAGRLPGRTPNGVKNYWNTHMSEKGRVISSQGREVEEKAQETTMRSRTPTAIKPQGFRLSPSRSSSSWWRNKNPDGGEVSEDKSASSSSGPDEEQNQKQVDEESVEWWKCLLLDDNDIENEGQEKIGSSLSTSSSTSSTEQDGKSDQFWDQQLTWTDDFPLITTLPDFLA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00021 222 MobiDBLite consensus disorder prediction 171 200 - -
Pral5741g00021 222 SMART sant 27 75 IPR001005 -
Pral5741g00021 222 CDD SANT 31 73 IPR001005 -
Pral5741g00021 222 Pfam Myb-like DNA-binding domain 29 72 IPR001005 -
Pral5741g00021 222 MobiDBLite consensus disorder prediction 175 200 - -
Pral5741g00021 222 MobiDBLite consensus disorder prediction 80 95 - -
Pral5741g00021 222 Gene3D - 29 104 - -
Pral5741g00021 222 SUPERFAMILY Homeodomain-like 9 76 IPR009057 -
Pral5741g00021 222 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 77 IPR017930 -
Pral5741g00021 222 MobiDBLite consensus disorder prediction 132 146 - -
Pral5741g00021 222 MobiDBLite consensus disorder prediction 96 125 - -
Pral5741g00021 222 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 9 182 - -
Pral5741g00021 222 Gene3D - 3 27 - -
Pral5741g00021 222 ProSiteProfiles Myb-like domain profile. 23 73 IPR001005 -
Pral5741g00021 222 MobiDBLite consensus disorder prediction 80 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5741g00021 Pral-Chr5741 82763 83917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00021 9 76 MYB Transcription Factor Family AT1G66370 77.941 8.98e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral5741g00021 Myb_DNA-binding 7.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5741g00021 - K09422 gmx:100306270 143.665