Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00020 ATGGAGACATCCTCCTCGGGACTGAGAACTGGCAAGTGGTGTAAAGAAGAAGATGATCTTCTCAAGGCCTGTGTTCTTAAGTATGGTGAAGGAAAATGGCACCTTATTCCTCAGAGATCAGGCTTGAAAAGATGCAGAAAAAGCTGTAGGCTGAGGTGGTTAAACTATCTGAAACCGGACATCAAGTGGGGAGACTTCTCTGAGGATGAAATTGATATGATGATCAGGCTTCACAGACTCCTGGGAAACAGATGGTCACTGATAGCTGGAAGGCTTCCTGGAAGAACACCAAACGGTGTGAAAAACTACTGGAACACCCATATGAGTGAGAAGGGACGAGTTATTTCATCTCAGGGGAGAGAGGTGGAAGAAAAAGCACAGGAAACAACCATGAGAAGCCGTACACCAACAGCAATAAAACCTCAAGGTTTCAGGTTATCGCCATCAAGAAGCTCATCGTCTTGGTGGAGAAATAAGAATCCAGATGGTGGTGAAGTTAGCGAAGACAAAAGTGCAAGCAGTAGTAGTGGGCCAGATGAAGAGCAAAACCAGAAGCAGGTAGATGAGGAGTCGGTGGAGTGGTGGAAATGCTTGCTTCTTGATGATAACGACATTGAGAACGAAGGTCAAGAGAAAATTGGCTCATCATTATCAACATCATCATCAACGTCATCCACGGAGCAAGATGGCAAGTCTGATCAATTCTGGGACCAGCAACTTACTTGGACTGATGACTTTCCTCTAATCACCACTCTCCCGGATTTTCTAGCCTAA 774 0.4522 METSSSGLRTGKWCKEEDDLLKACVLKYGEGKWHLIPQRSGLKRCRKSCRLRWLNYLKPDIKWGDFSEDEIDMMIRLHRLLGNRWSLIAGRLPGRTPNGVKNYWNTHMSEKGRVISSQGREVEEKAQETTMRSRTPTAIKPQGFRLSPSRSSSSWWRNKNPDGGEVSEDKSASSSSGPDEEQNQKQVDEESVEWWKCLLLDDNDIENEGQEKIGSSLSTSSSTSSTEQDGKSDQFWDQQLTWTDDFPLITTLPDFLA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00020 257 MobiDBLite consensus disorder prediction 210 236 - -
Pral5741g00020 257 SMART sant 62 110 IPR001005 -
Pral5741g00020 257 SMART sant 9 59 IPR001005 -
Pral5741g00020 257 Pfam Myb-like DNA-binding domain 64 107 IPR001005 -
Pral5741g00020 257 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Pral5741g00020 257 MobiDBLite consensus disorder prediction 131 160 - -
Pral5741g00020 257 CDD SANT 12 57 IPR001005 -
Pral5741g00020 257 MobiDBLite consensus disorder prediction 114 130 - -
Pral5741g00020 257 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Pral5741g00020 257 FunFam Myb transcription factor 10 62 - -
Pral5741g00020 257 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Pral5741g00020 257 CDD SANT 66 108 IPR001005 -
Pral5741g00020 257 Gene3D - 64 138 - -
Pral5741g00020 257 Gene3D - 2 63 - -
Pral5741g00020 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 61 IPR017930 -
Pral5741g00020 257 MobiDBLite consensus disorder prediction 206 236 - -
Pral5741g00020 257 MobiDBLite consensus disorder prediction 114 188 - -
Pral5741g00020 257 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 217 - -
Pral5741g00020 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 112 IPR017930 -
Pral5741g00020 257 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Pral5741g00020 257 MobiDBLite consensus disorder prediction 167 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5741g00020 Pral-Chr5741 82763 83993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00020 1 111 MYB Transcription Factor Family AT1G66370 70.270 1.04e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5741g00020 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5741g00020 - K09422 zju:112489267 196.823