Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00012 ATGGCAGCTCGTGTAATCACGGTTTCACAGACCGGAAGAGGAGACTATCGGACGGTGCAGGAAGCAATTGATGCCATCCCACTGGGAAACAACCGTCGGACGGTGATTCGAGTGTCTCCGGGAATCTACAAGCAGCCAGTGTACGTACCCAAGACTAAGAATTTCATCACCCTTGCTGGTCTGTGCCCAGAGGATACTGTGCTTACGTGGAATAATACCGCCACCAGAATCGAACACCACCAGGCTGCTCGGGTAATAGGCACTGGTACTTTTGGCTGTGGTAGTACCATTGTGGAAGGAGAGGATTTTATTGCCGAGAACATCACGTTCGAGAATTCCTCCCCTCAGGGTTCAGGGCAAGCAGTGGCAATCAGAGTGACAGCAGATCGATGTGCCTTTTATAACTGCAGGTTCCTGGGATGGCAGGACACTCTGTACTTACACTATGGGAAACAGTACTTGAAAGATTGTTATATTGAAGGAAGCGTGGACTTCATTTTTGGCAATAGCACTGCTCTTTTGGAACATTGCCATATTCACTGCAAGTCTGAAGGCTTCATTACTGCACAGAGCAGAAAATCTTCTCATGAAACAACGGGTTATGTATTCCTAAGATGTGTCATAACGGGTAATGGAAATAATTCATACGCATATCTTGGACGACCATGGGGACCTTTTGGAAGAGTGATCTTTGCATACACTTATATGGATCGATGTATAAGGCCTCATGGCTGGAATAATTGGGATAAAATTGAGAATGAGAGAACGGCTTGCTTTTATGAATACAGGTGTTATGGACATGGTTGCTGCCCATCCAATCGAGTAGCATGGGCTAGAGAATTGATAGATGAAGAGGCAGAGCAGTTCCTTTCACATCGTTTCATTGACCCAGATGCTAATAGACCTTGGCTTGCCCAAAGAATGGCCTTGAGGATTCCATATTCTGCTTAG 951 0.4595 MAARVITVSQTGRGDYRTVQEAIDAIPLGNNRRTVIRVSPGIYKQPVYVPKTKNFITLAGLCPEDTVLTWNNTATRIEHHQAARVIGTGTFGCGSTIVEGEDFIAENITFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSEGFITAQSRKSSHETTGYVFLRCVITGNGNNSYAYLGRPWGPFGRVIFAYTYMDRCIRPHGWNNWDKIENERTACFYEYRCYGHGCCPSNRVAWARELIDEEAEQFLSHRFIDPDANRPWLAQRMALRIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00012 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 303 - -
Pral5741g00012 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Pral5741g00012 316 Pfam Pectinesterase 6 296 IPR000070 GO:0030599|GO:0042545
Pral5741g00012 316 FunFam Pectinesterase 2 309 - -
Pral5741g00012 316 Gene3D - 1 310 IPR012334 -
Pral5741g00012 316 SUPERFAMILY Pectin lyase-like 2 303 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5741g00012 Pral-Chr5741 48172 51631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00012 4 309 Carbohydrate Esterase AT5G47500 39.241 3.77e-71 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5741g00012 K01051 - tcc:18601567 594.349