Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00006 ATGGATGGATCAACTGGTCGTGGTGGTACTGGTGGGGACATGTTTCTATCAAATTATAAATTGGGGAAAACACTTGGTATTGGATCCTTTGGGAAGGTGAAAATTGCAGAGCATGTTTTGACAGGTCACAAAGTTGCCATTAAGATCCTCAACAAACGTAAGATAAAGAACATGGAAATGGAAGAAAAAGTCAGAAGAGAAATCAAAATTTTAAGATTGTTCATGCATCCTCACATCATACGACTTTATGAAGTCATAGAAACCCCGGTAGACATATTTGTTGTGATGGAGTATGTAAAATCTGGAGAGCTCTTTGACTACATAGTAGAAAAGGGGAGGCTGCAAGAAGATGAAGCTCGTAATTTTTTTCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGCTCACAGAGACTTGAAGCCTGAGAATTTGCTGTTGGACTCCAAATGCAATGTCAAGATAGCAGATTTTGGCCTGAGCAATGTCATGGTTGATGGTCATTTCCTTAAGACAAGTTGTGGAAGCCCAAACTATGCTGCTCCTGAGGTAATCTCTGGAAAACATTATGCTGGGCCTGAAGTAGATGTTTGGAGCTGTGGTGTAATTTTATACGCTCTTCTTTGTGGTACTCTTCCTTTTGATGATGAAAACATTCCAAACCTTTTCAAGAAAATTAAGGGCGGGATATACACTCTTCCTAGTCATCTATCACCTGGTGCTAGAGATCTGATACCGAGGATGCTCGTGGTTGATCCTATGAAAAGGGTGACTATACCTGAGATCCGTCAACACCCATGGTTCCAGGCTCATCTCCCTCGTTATTTGGCAGTGCCACCACCTGATACTTCACAACAAGCCAAAAAGATTGATGAGGAAATTCTTCAGGAAGTGGTTAATATGGGATTTGATAGGAATCAGTTGGTTGAATCTCTTCGCAACAGGATACAGAATGAGGGTACTGTAGCATATTATTTGCTACTGGACAATCGATTCCGCGTTTCAAGTGGCTATCTTGGCGCTGAGTTCCAAGAGAGTATGGATACTGGTTATAACTCGTTGCATCCTAGTGAACTTGCTGCTCCAGCTGTTGGGAACCGCTTCCCAGGATATATGGATTATCAAGGAGCTGGATTGAGGCCACAGTTGCCTGTTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGGGCCCATCCCCGTGAAATAATGACTGAGGTCCTTAAAGCTCTGCAAGAATTGAATGTGGGTTGGAAGAAGATTGGGCACTATAACATGAAGTGCCGGTGGGTTGCTGGCATCCTGGGTCATCCTGAAGGAATGGTGAACAATCATAATCATTACTTTGGAGATGATTCTGCTGTTATTGAGAATGATGCCGTTTCTAAGTCAAATGTAGTCAAGTTTGAAATGCAGCTTTACAAAACCCGTGAAGAGAAGTATCTGCTTGATCTTCAAAGGGTCCAGGGCCCACAGTTGCTCTTCTTGGATCTTTGTGCTTCCTTCCTTGCGCAGCTACGTGTCCTCTAG 1536 0.4323 MDGSTGRGGTGGDMFLSNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNKRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPVDIFVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCNVKIADFGLSNVMVDGHFLKTSCGSPNYAAPEVISGKHYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRVTIPEIRQHPWFQAHLPRYLAVPPPDTSQQAKKIDEEILQEVVNMGFDRNQLVESLRNRIQNEGTVAYYLLLDNRFRVSSGYLGAEFQESMDTGYNSLHPSELAAPAVGNRFPGYMDYQGAGLRPQLPVERKWALGLQSRAHPREIMTEVLKALQELNVGWKKIGHYNMKCRWVAGILGHPEGMVNNHNHYFGDDSAVIENDAVSKSNVVKFEMQLYKTREEKYLLDLQRVQGPQLLFLDLCASFLAQLRVL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00006 511 FunFam Non-specific serine/threonine protein kinase 10 349 - -
Pral5741g00006 511 FunFam Non-specific serine/threonine protein kinase 395 509 - -
Pral5741g00006 511 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 462 510 IPR001772 -
Pral5741g00006 511 PANTHER SERINE/THREONINE KINASE 18 336 - -
Pral5741g00006 511 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 292 332 IPR015940 -
Pral5741g00006 511 CDD STKc_AMPK_alpha 16 271 - -
Pral5741g00006 511 Pfam Protein kinase domain 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5741g00006 511 Gene3D Kinase associated domain 1, KA1 395 509 - -
Pral5741g00006 511 SMART uba_6 294 331 IPR015940 -
Pral5741g00006 511 CDD UBA_SnRK1_plant 293 333 - -
Pral5741g00006 511 Pfam Kinase associated domain 1 468 510 IPR001772 -
Pral5741g00006 511 SMART serkin_6 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5741g00006 511 ProSiteProfiles Protein kinase domain profile. 19 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5741g00006 511 Gene3D Transferase(Phosphotransferase) domain 1 11 349 - -
Pral5741g00006 511 FunFam Non-specific serine/threonine protein kinase 10 98 - -
Pral5741g00006 511 Pfam UBA/TS-N domain 293 329 IPR015940 -
Pral5741g00006 511 CDD AMPKA_C 389 508 - -
Pral5741g00006 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Pral5741g00006 511 SUPERFAMILY Protein kinase-like (PK-like) 15 288 IPR011009 -
Pral5741g00006 511 SUPERFAMILY KA1-like 328 510 IPR028375 -
Pral5741g00006 511 SUPERFAMILY UBA-like 281 330 IPR009060 GO:0005515
Pral5741g00006 511 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5741g00006 Pral-Chr5741 28015 33980 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00006 16 272 CBL-interacting serine-threonine protein kinases AT2G26980 52.308 2.48e-92 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Pral5741g00006 Pkinase 4.7e-80 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5741g00006 K07198 - gmx:100796687 940.643