Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5741g00003 ATGGGTTGCATTAACTCCAAAAATTTGGTTGCCGGAGATTCACCCTTGCGCTCGAAGGTGCGTACCAACAATGGGTCCGCTATTGTGGAACCTCCGTCCAAATCCCGATCGGGGACCTTGGCTTCTGCCGGTAAAGGGGATCAAAAATCGGAGGATTGCAATCGAGATGGGAAGAAGTCCGGGAAGGATAGCTCCAAAGGAAGCGGGAATTTCAGTTTCAAGATGGGGCTTTCACATCGGTTGGTGGAAGCGGAGCTGAATGCGGCTGGATGGCCCCCTTGGCTCACAGCTGCTGCGGGCGAAGCTATTCATGGATGGGTGCCCCTCAGAGCAGATTCTTTTGAAAAATTAGAGAAGATTGGACAAGGTACATATAGCAGTGTGTTCCGAGCACGTGAAGTTGAAACTGGGAGGATGTTTGCCCTGAAGAAGGTTCGGTTTGACAATTTTCAGCCTGACAGCGTGAGGTTCATGTCGAGAGAAATTACAATTCTTCGCAGGCTTGACCATCCAAACATTATGAAACTGGAGGGTGTAATTACATCCCGACTATCAAGTAGTTTATACCTTGTGTTTGAATATATGGAGCATGATCTTGCGGGACTAGTATCATGTCCTGACATAACGTTCAAGGATTCACAGGTGAAATGTTACATGAGACAACTACTGAGTGGAGTTGAGCACTGTCATCTACGTGGTATCATCCATCGAGACATTAAAGTATCCAATATATTAGTAAATAATGATGGTATACTCAAGATTGGCGATTTTGGATTGGCAAATACAATTAGCTCAGGTAACAAGCATCCTTTGACCAGTCGCGTAGTGACTCTATGGTATCGTCCTCCTGAACTCTTGATGGGATCAACCAACTATGGATTATCAGTGGATCTATGGAGTGTGGGTTGTGTATTTGGGGAACTTTTTCTGGGAAAACCTATCCTCAAGGGGAGAACTGAGGTTGAACAATTGCATAAAGTTTTTAAGCTTTGCGGTTCACCACCTGATGAATTCTGGAAAAAGTGCAAGCTTCCTCACGCAACAATGTTTAAACCTCAGATTGCTTACGAAAACTCTTTTTCGGAGAGGTTTCAAGATATCCCAGAAACTGCTCTAGCCCTAATGAAGACTCTACTATCCATTGATCCCCATGAGCGTGGGACTGCTTCTTCTGCTCTGATGTCTGAGTATTTCAACACCAAGCCGCTTGCTTGTGATCCCTCAAGCCTGCCAAAATATCCACCCAACAAAGAAATGGATGCTAAAAATCGGGAAGAGGTTCGCAGGAAAAAGACAGGAGGTAAAGTGCATGAGTCTGCGACAGCAAGAAAGCAAAGACGAGTCCGTAAAGTTCTACAAGAACCAAACAATTTCAGTAACCCACTTTCAACTGATGAAAAGCAGAACAATTCTCAACAAGCTGTTAAAGACGATGTTAAACCAAATGTTAACAAGGGTAAAGGAGGAGCTATGCAGCAGAAGGAGCCATCAAAGCTTCCAACGGAAGCAGTGTCAGAGACCTACCAGATCAATGGCGTACCCCATGGCTTTAGTATATTAACAGGGCCAGCACCAGCCTCAGGTGCTAGTGGCTTTGCATGGGCAAAAAGGAGAAAACCAGAGGTTTCATCCACATTATCAGATGGTTCAAAAAGCAAAATTAGCGCACTGGATCCAACCTTTGCAAAAGGCACATATGATTTAACCAGACATATGATCGATGTCGCAGAAAGACAATATAAGGACAACACAAGCCATCACGCTCACACTAATGCATCTGATACAAGTTCTAATTTCTCAATTGATTCTACGGAAACGCCAGCCGGCACGACAAGTGCTCAGGGCCGCAAAAGACTTGGCAATGAAAGCACACGCCCTGCAACCGGCAAATCAAGGCTAGGAAGATAA 1908 0.4497 MGCINSKNLVAGDSPLRSKVRTNNGSAIVEPPSKSRSGTLASAGKGDQKSEDCNRDGKKSGKDSSKGSGNFSFKMGLSHRLVEAELNAAGWPPWLTAAAGEAIHGWVPLRADSFEKLEKIGQGTYSSVFRAREVETGRMFALKKVRFDNFQPDSVRFMSREITILRRLDHPNIMKLEGVITSRLSSSLYLVFEYMEHDLAGLVSCPDITFKDSQVKCYMRQLLSGVEHCHLRGIIHRDIKVSNILVNNDGILKIGDFGLANTISSGNKHPLTSRVVTLWYRPPELLMGSTNYGLSVDLWSVGCVFGELFLGKPILKGRTEVEQLHKVFKLCGSPPDEFWKKCKLPHATMFKPQIAYENSFSERFQDIPETALALMKTLLSIDPHERGTASSALMSEYFNTKPLACDPSSLPKYPPNKEMDAKNREEVRRKKTGGKVHESATARKQRRVRKVLQEPNNFSNPLSTDEKQNNSQQAVKDDVKPNVNKGKGGAMQQKEPSKLPTEAVSETYQINGVPHGFSILTGPAPASGASGFAWAKRRKPEVSSTLSDGSKSKISALDPTFAKGTYDLTRHMIDVAERQYKDNTSHHAHTNASDTSSNFSIDSTETPAGTTSAQGRKRLGNESTRPATGKSRLGR 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5741g00003 635 Gene3D Phosphorylase Kinase; domain 1 101 196 - -
Pral5741g00003 635 MobiDBLite consensus disorder prediction 48 63 - -
Pral5741g00003 635 ProSiteProfiles Protein kinase domain profile. 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5741g00003 635 SUPERFAMILY Protein kinase-like (PK-like) 107 404 IPR011009 -
Pral5741g00003 635 MobiDBLite consensus disorder prediction 582 635 - -
Pral5741g00003 635 SMART serkin_6 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5741g00003 635 Gene3D Transferase(Phosphotransferase) domain 1 197 438 - -
Pral5741g00003 635 MobiDBLite consensus disorder prediction 17 44 - -
Pral5741g00003 635 FunFam probable serine/threonine-protein kinase At1g54610 197 437 - -
Pral5741g00003 635 MobiDBLite consensus disorder prediction 589 628 - -
Pral5741g00003 635 MobiDBLite consensus disorder prediction 1 69 - -
Pral5741g00003 635 FunFam probable serine/threonine-protein kinase At1g54610 101 196 - -
Pral5741g00003 635 MobiDBLite consensus disorder prediction 452 478 - -
Pral5741g00003 635 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
Pral5741g00003 635 PANTHER CELL DIVISION PROTEIN KINASE 112 403 - -
Pral5741g00003 635 MobiDBLite consensus disorder prediction 417 451 - -
Pral5741g00003 635 Pfam Protein kinase domain 114 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5741g00003 635 CDD STKc_CDK9_like 114 398 - -
Pral5741g00003 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Pral5741g00003 635 MobiDBLite consensus disorder prediction 404 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5741g00003 Pral-Chr5741 19137 24720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5741g00003 106 430 Core Cell Cycle Gene Families AT5G10270 45.294 7.05e-105 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral5741g00003 Pkinase 2.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5741g00003 - - qsa:O6P43_004446 782.711