Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5740g00003 ATGGGAAACTACTGGGGATTAAGAGTGATACTGATAAGCATGGTGGTGGTGGTGGTGCCGATAATGGCTGCGATGGGAGATCCGATGCTGCACAAGGTGGGTGGATCCAAAGGCTGGATCAATCACGACGTTAACTATACTGAATGGTCTGCTCATGAGCAATTCTTTCTTGGCGATTGGCTCCTATTCAACTTTGACAAACGATACTTCAACGTTCTGGAGGTGAACGAGACGAGCTACGAGAATTGCAGAGACGAAGGGTTCGTGAAAAACTTGACGCGTGGTGGGAGAGATGTGGTGCAGTTGACAGAGGCAAGGACACACTACTACCTCTCTAGCGGAGGCTATTGCTTTCAGGGTATGAAAGTCGCCGTCACCGTCCAACACGGCCACCGCGAAGCAGCTCCTGCGCCGTCTCCCTCTCACTCTTCTGCGTCTTCTGCTTTCTCCTTTGACATTTCTGTTTCAACTATCGATTTCTGCGACAGGATGGGTTACTGTCCATTTATTCAGGATAATGAATCCAACAGGAAAGAGGAGTTGGTATCAGTTCGTGACCCAAGGGCCCTGACATTCTCTTTGTTTAGAGGTTGGCGCCCGGGAGGTGCAATTAAAGTATATGCGCCGACTTTCACAGCACAAGCCCACGACGGCAAAAGATCATCTAGATGA 672 0.4955 MGNYWGLRVILISMVVVVVPIMAAMGDPMLHKVGGSKGWINHDVNYTEWSAHEQFFLGDWLLFNFDKRYFNVLEVNETSYENCRDEGFVKNLTRGGRDVVQLTEARTHYYLSSGGYCFQGMKVAVTVQHGHREAAPAPSPSHSSASSAFSFDISVSTIDFCDRMGYCPFIQDNESNRKEELVSVRDPRALTFSLFRGWRPGGAIKVYAPTFTAQAHDGKRSSR 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5740g00003 223 Gene3D - 29 133 IPR008972 -
Pral5740g00003 223 PANTHER BLUE COPPER PROTEIN 30 142 IPR039391 GO:0009055
Pral5740g00003 223 ProSiteProfiles Phytocyanin domain profile. 29 129 IPR003245 GO:0009055
Pral5740g00003 223 FunFam Lamin-like protein 27 130 - -
Pral5740g00003 223 Pfam Plastocyanin-like domain 41 121 IPR003245 GO:0009055
Pral5740g00003 223 SUPERFAMILY Cupredoxins 30 128 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5740g00003 Pral-Chr5740 20999 23854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5740g00003 1 141 Phytocyanin Superfamily AT2G27035 41.549 5.84e-38 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5740g00003 - - pcin:129296295 228.409