Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5740g00001 GTGCTTGGGAAGTTATTGTCAGTAGCAGCGGCGGCGGGGACAGTGGCCTCGACGTCGTCGCCTGATGACACTAGTCCAAACGCCAATTCGTCCGTCGAGTGCTATGCCTGTACTCAGGTGGGTGTTCCCGTCTTCCACTCCACCAGCTGCGACAGCTATCATCCGCCACAATGGGAGGCTTCCGCGGGTTCTTCCTTAGTCCCTATCCAGAACAGAACCGCGGTGAGGAATCCGAGGCAACGACCCAAATCGGGGCCGTTCGGTCGACTGTTGGACCCGAGGAGCAAGCGCGTGCAGACCTGGAACAGGGCTCTGCTGCTGGCGAGAGGGTTGGCGCTGGCGGTGGACCCGTTGTTCTTCTACGCGCTGTCAATTGGGAGGGACGGGACGCCGTGCCTGTACATGGACGGCGGTTTAGCGGCGATAGTGACGGTGCTGAGGACGTTGGTGGACGTGGTTCACGTGTTCCACGTGTGGTTGCAGTTCAGGCTGGCGTACGTGTCGAAGGAGTCGATGGTGGTTGGGTGTGGGAAGCTGGTGTGGGACGCGCGTGCCATAGCAGCGCATTACCTGAGGTCATTCAGGGGCTTCTGGTTCGACGCCTTTGTGATACTTCCCGTTCCTCAGGCGGTGTTTTGGCTTGTACTCCCAAAGTTGATAAGAGAAGAGCAAATTAAAATCATAATGACTATAATGCTATTGATCTTCTTGTTTCAATTTCTGCCCAAGGTTTACCACAGCATCTGCATGATGAGGAGGATGCAAAAAGTCACGGGCTATATCTTCGGCACCATTTGGTGGGGCTTTGGCCTCAACCTCATAGCTTACCTTATTGCTTCTCATGTAGCAGGAGGGTGTTGGTATGTGCTTGCAATTCAACGTGTAGCGTCGTGCCTGAGCCAGCAGTGTGAAAGAGGGTATGGATGCGATCTCCCTCTGTCATGTTCAGATGAAGTGTGTTACAAGTTTCTGTCACCAACAGGCACAGAAGGAACTTCATGTAATGGAAACTTCACAGTCGTCGCAAGAAAGCCATTGTGTTTAGATGTGAAAGGACCTTTTAAATATGGGATCTACCAATGGGCTCTCCCGGTCATTTCCAGTAACTCTCTGGCTGTCAAGATTCTTTATCCCATATTTTGGGGTTTGATGACCCTCAGCACTTTTGGCAACGATCTTGAGCCCACAAGTAACTGGCTAGAAGTGATTTTCAGCATTTGCATCGTACTCAGCGGACTAATGCTCTTCACTCTGTTGATTGGTAACATCCAGGTATTCTTGCACGCAGTAATGGCGAAGAAAAGAAAGATGCAGCTGAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGCTCCCGTCCCATTTAAGACAGAGGGTTCGCCAGTTTGAACGCCAGCGATGGGCAGCAATGGGAGGAGAGGACGAAATGGAATTGATCAGGGACCTTCCTGAAGGATTGAGGAGCATCAAGCGTTATCTTTGCTTAGACCTCATCAAAAAGGTACCTCTGTTTCACAACTTGGATGATCTTATCCTTGACAACATCTGTGATAGGGTTAAACCCCTAGTCTTCTCTAAAGACGAAAAGATAATCAGGGAAGGGGACCCAGTGCCAAGAATGGTATTCATAGTCCGCGGGCGCATAAAACGCATGCAACGCCTAAGCAAAGGCATGGTGGCCACCAGCATAATCGAAGCTGGGGGTTTCTTGGGGGACGAGCTTCTCTCCTGGTGCCTTCGCCGGCCGTTCCTCGACCGACTTCCGGCATCGTCCGCCACGTTCATATGCCTGGAATCGGCAGAAGCCTTTGGGTTGGATTCAACTCACCTCAAGTACGTGACGGACCACTTCAGGTACAAGTTTGCCAACGAGAGGCTGAAGAGAACGGCGAGATATTACTCATCGAATTGGAGAACGTGGGCTGCCGTGAACATACAGTTTGCATGGCGGCGATACAGGCAGAGGACAAGAGGTCCGGTGACCCCTGTGATCGAAGCTGGAGGAAGCAGTAGCGCTGAACGCAAGCTCTTGCAGTATGCTGCCATGTTCATGTCAATAAGGCCACATGACCACCTTGAATGA 2088 0.5192 VLGKLLSVAAAAGTVASTSSPDDTSPNANSSVECYACTQVGVPVFHSTSCDSYHPPQWEASAGSSLVPIQNRTAVRNPRQRPKSGPFGRLLDPRSKRVQTWNRALLLARGLALAVDPLFFYALSIGRDGTPCLYMDGGLAAIVTVLRTLVDVVHVFHVWLQFRLAYVSKESMVVGCGKLVWDARAIAAHYLRSFRGFWFDAFVILPVPQAVFWLVLPKLIREEQIKIIMTIMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYLIASHVAGGCWYVLAIQRVASCLSQQCERGYGCDLPLSCSDEVCYKFLSPTGTEGTSCNGNFTVVARKPLCLDVKGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSHLRQRVRQFERQRWAAMGGEDEMELIRDLPEGLRRXIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVPRMVFIVRGRIKRMQRLSKGMVATSIIEAGGFLGDELLSWCLRRPFLDRLPASSATFICLESAEAFGLDSTHLKYVTDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTRGPVTPVIEAGGSSSAERKLLQYAAMFMSIRPHDHLE 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5740g00001 696 Gene3D Helix hairpin bin 432 497 - -
Pral5740g00001 696 ProSiteProfiles cAMP/cGMP binding motif profile. 506 585 IPR000595 -
Pral5740g00001 696 Pfam Ion transport protein 100 424 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral5740g00001 696 Gene3D - 131 429 - -
Pral5740g00001 696 Coils Coil 695 696 - -
Pral5740g00001 696 MobiDBLite consensus disorder prediction 71 91 - -
Pral5740g00001 696 SUPERFAMILY Voltage-gated potassium channels 92 427 - -
Pral5740g00001 696 Gene3D Jelly Rolls 504 622 IPR014710 -
Pral5740g00001 696 SUPERFAMILY cAMP-binding domain-like 433 620 IPR018490 -
Pral5740g00001 696 CDD CAP_ED 506 613 IPR000595 -
Pral5740g00001 696 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 81 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5740g00001 Pral-Chr5740 1256 4690 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5740g00001 30 696 Ion Channels AT5G15410 78.287 0.0 1047
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5740g00001 K05391 - qsa:O6P43_004432 1149.42