Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral573g00005 | ATGGCGATGCAAGGTGTGCAGAAGAACACGCTGTACGTGGGAGGGTTAGCGGAGGAGGTGAACGAGTCCATCCTTCACGCTGCCTTCATACCCTTTGGCGACATCAAGGACGTCAAGACGCCCCTTGATCAGGCCACTCAGAAGCACCGATCTTTCGGCTTCGTCACCTTCTTGGAGAGGGAGGACGCCGCCGCCGCCATGGACAACATGGACGGCTCTGAACTTTACGGCCGTGTGCTCACTGTTAACTACGCCCTTCCTGAGCGTATAAAGGGTGGTGAACAGGGTTGGGCTGCGCAGCCAATTTGGGCGGATGCGGATACATGGTTTGAGCGGCAGCAGCAAGAAGAGGAAATGCGTCGTATTGAGGCAGAAAATCGAGCTGCAATGCAAGCTGCAGAAGACATACGTAGAAAACAACTAGCCCAAGAGCGAGAAGGAGAAAGGAAGAGGAAATTGACATCAAGTGATCCTATGGCAAAGGCTGAAGCAGAGGTTCTGAAAGAAAATGGTTCTTAA | 519 | 0.5279 | MAMQGVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDAAAAMDNMDGSELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMRRIEAENRAAMQAAEDIRRKQLAQEREGERKRKLTSRXDPMAKAEAEVLKENGS | 173 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral573g00005 | 173 | CDD | RRM_PPIE | 11 | 85 | IPR034168 | GO:0003723 | |
Pral573g00005 | 173 | Gene3D | - | 2 | 158 | IPR012677 | - | |
Pral573g00005 | 173 | Coils | Coil | 112 | 139 | - | - | |
Pral573g00005 | 173 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 9 | 87 | IPR000504 | GO:0003723 | |
Pral573g00005 | 173 | FunFam | Peptidyl-prolyl cis-trans isomerase | 1 | 154 | - | - | |
Pral573g00005 | 173 | SUPERFAMILY | RNA-binding domain, RBD | 6 | 96 | IPR035979 | GO:0003676 | |
Pral573g00005 | 173 | PANTHER | ATPASE E1 | 3 | 171 | - | - | |
Pral573g00005 | 173 | SMART | rrm1_1 | 10 | 83 | IPR000504 | GO:0003723 | |
Pral573g00005 | 173 | MobiDBLite | consensus disorder prediction | 128 | 173 | - | - | |
Pral573g00005 | 173 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 11 | 80 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral573g00005 | Pral-Chr573 | 29555 | 32073 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral573g00005 | 9 | 87 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 37.975 | 3.86e-11 | 58.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral573g00005 | - | - | mcha:111005196 | 294.664 |