Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral573g00002 ATGGCATGCGCGGAGGCGGTTCAGCAAAACAATTTGAAGCTAGTGGAAGCACTTGTGGAGCATGTGGGGAGGTTGGTGGCGTCTCAAGCCAAAGCAATGAGGAAGGTGGCTTGCTGCTTTGCTCAAGCTTTAGCTCATTGGATTTACAGAATTTCTCAACCGTTCATCGAGTCCTACCCTTACTTGAAATTTGCCCATTTCACGGCGAACCAAGCCATCCTTGAAGCGTTCCCCACCGCTGATAGAGTTCACGTCATCGATTTCGAGCTCAGGCAGGGGATGCAATGGCCGGCATTAATGCAAGCCCTTGCATTACAACCCAATGGTCCTCTGACTTTCCGCCTCACCGGAATCGGAACTCCATGA 366 0.5109 MACAEAVQQNNLKLVEALVEHVGRLVASQAKAMRKVACCFAQALAHWIYRISQPFIESYPYLKFAHFTANQAILEAFPTADRVHVIDFELRQGMQWPALMQALALQPNGPLTFRLTGIGTP 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral573g00002 121 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 120 IPR005202 -
Pral573g00002 121 Pfam GRAS domain family 1 52 IPR005202 -
Pral573g00002 121 Pfam GRAS domain family 53 120 IPR005202 -
Pral573g00002 121 ProSiteProfiles GRAS family profile. 1 121 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral573g00002 Pral-Chr573 6183 6548 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral573g00002 1 119 GRAS Transcription Factor Family AT1G66350 64.925 2.57e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral573g00002 GRAS 1.3e-28 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral573g00002 K14494 - gmx:100799695 173.326